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Cluster: HRGMv2_1784_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1784_17 HRGMv2_1784_17_133 142694 144073 - GH4
TC HRGMv2_1784_17 HRGMv2_1784_17_134 144087 145646 - 4.A.1.1.16
pfam HRGMv2_1784_17 HRGMv2_1784_17_135 145874 147589 - AsmA
TC HRGMv2_1784_17 HRGMv2_1784_17_136 147743 149134 - 2.A.40.4.2
TC HRGMv2_1784_17 HRGMv2_1784_17_137 149421 150623 + 2.A.27.1.1
pfam HRGMv2_1784_17 HRGMv2_1784_17_138 150802 152307 - FGGY_N | FGGY_C
TC HRGMv2_1784_17 HRGMv2_1784_17_139 152329 153174 - 1.A.8.1.1
pfam HRGMv2_1784_17 HRGMv2_1784_17_140 153738 153977 + ZapB
TC HRGMv2_1784_17 HRGMv2_1784_17_141 154139 155128 + 3.A.1.6.1
Gene ID: HRGMv2_1784_17_133
Type: CAZyme
Location: 142694 - 144073 (-)
Gene ID: HRGMv2_1784_17_134
Type: TC
Location: 144087 - 145646 (-)
Gene ID: HRGMv2_1784_17_135
Type: pfam
Location: 145874 - 147589 (-)
Gene ID: HRGMv2_1784_17_136
Type: TC
Location: 147743 - 149134 (-)
Gene ID: HRGMv2_1784_17_137
Type: TC
Location: 149421 - 150623 (+)
Gene ID: HRGMv2_1784_17_138
Type: pfam
Location: 150802 - 152307 (-)
Gene ID: HRGMv2_1784_17_139
Type: TC
Location: 152329 - 153174 (-)
Gene ID: HRGMv2_1784_17_140
Type: pfam
Location: 153738 - 153977 (+)
Gene ID: HRGMv2_1784_17_141
Type: TC
Location: 154139 - 155128 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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