dbCAN Logo

Cluster: HRGMv2_1784_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_17 HRGMv2_1784_17_17 19177 19557 + 1.A.77.3.8
TC HRGMv2_1784_17 HRGMv2_1784_17_18 19566 20381 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_19 20429 20668 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_20 20723 21193 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_21 21208 21741 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_22 21754 23295 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_23 23346 24209 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_24 24236 25618 + 3.A.2.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_25 25639 26058 + 3.A.2.1.1
CAZyme HRGMv2_1784_17 HRGMv2_1784_17_26 26465 28636 - PL9_1
pfam HRGMv2_1784_17 HRGMv2_1784_17_27 28982 30352 + Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2
STP HRGMv2_1784_17 HRGMv2_1784_17_28 30539 32368 + SIS | SIS
TC HRGMv2_1784_17 HRGMv2_1784_17_29 32708 33748 + 3.A.1.7.1
TC HRGMv2_1784_17 HRGMv2_1784_17_30 33883 34842 + 3.A.1.7.1
TC HRGMv2_1784_17 HRGMv2_1784_17_31 34842 35732 + 3.A.1.7.1
TC HRGMv2_1784_17 HRGMv2_1784_17_32 35778 36551 + 3.A.1.7.1
pfam HRGMv2_1784_17 HRGMv2_1784_17_33 36603 37328 + PhoU | PhoU
pfam HRGMv2_1784_17 HRGMv2_1784_17_34 37426 38091 - Hydrolase | HAD_2
TC HRGMv2_1784_17 HRGMv2_1784_17_35 38260 39597 + 2.A.40.7.6
Gene ID: HRGMv2_1784_17_17
Type: TC
Location: 19177 - 19557 (+)
Gene ID: HRGMv2_1784_17_18
Type: TC
Location: 19566 - 20381 (+)
Gene ID: HRGMv2_1784_17_19
Type: TC
Location: 20429 - 20668 (+)
Gene ID: HRGMv2_1784_17_20
Type: TC
Location: 20723 - 21193 (+)
Gene ID: HRGMv2_1784_17_21
Type: TC
Location: 21208 - 21741 (+)
Gene ID: HRGMv2_1784_17_22
Type: TC
Location: 21754 - 23295 (+)
Gene ID: HRGMv2_1784_17_23
Type: TC
Location: 23346 - 24209 (+)
Gene ID: HRGMv2_1784_17_24
Type: TC
Location: 24236 - 25618 (+)
Gene ID: HRGMv2_1784_17_25
Type: TC
Location: 25639 - 26058 (+)
Gene ID: HRGMv2_1784_17_26
Type: CAZyme
Location: 26465 - 28636 (-)
Gene ID: HRGMv2_1784_17_27
Type: pfam
Location: 28982 - 30352 (+)
Gene ID: HRGMv2_1784_17_28
Type: STP
Location: 30539 - 32368 (+)
Gene ID: HRGMv2_1784_17_29
Type: TC
Location: 32708 - 33748 (+)
Gene ID: HRGMv2_1784_17_30
Type: TC
Location: 33883 - 34842 (+)
Gene ID: HRGMv2_1784_17_31
Type: TC
Location: 34842 - 35732 (+)
Gene ID: HRGMv2_1784_17_32
Type: TC
Location: 35778 - 36551 (+)
Gene ID: HRGMv2_1784_17_33
Type: pfam
Location: 36603 - 37328 (+)
Gene ID: HRGMv2_1784_17_34
Type: pfam
Location: 37426 - 38091 (-)
Gene ID: HRGMv2_1784_17_35
Type: TC
Location: 38260 - 39597 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List