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Cluster: HRGMv2_1784_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_13 HRGMv2_1784_13_95 92327 93256 - 9.B.62.1.1
TC HRGMv2_1784_13 HRGMv2_1784_13_96 93261 93641 - 9.B.62.1.5
TC HRGMv2_1784_13 HRGMv2_1784_13_97 93681 94577 - 1.B.76.1.5
CAZyme HRGMv2_1784_13 HRGMv2_1784_13_98 94577 96394 - AA1
NULL(UNKNOWN) HRGMv2_1784_13 HRGMv2_1784_13_99 96629 97078 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1784_13 HRGMv2_1784_13_100 97367 98104 + 1.A.34.1.3
pfam HRGMv2_1784_13 HRGMv2_1784_13_101 98138 98335 - DUF2933
TC HRGMv2_1784_13 HRGMv2_1784_13_102 98376 100817 - 3.A.3.5.4
pfam HRGMv2_1784_13 HRGMv2_1784_13_103 100945 101385 - DUF411
TC HRGMv2_1784_13 HRGMv2_1784_13_104 101472 104618 - 2.A.6.1.3
TC HRGMv2_1784_13 HRGMv2_1784_13_105 104629 105921 - 2.A.6.1.4
TC HRGMv2_1784_13 HRGMv2_1784_13_106 106035 106388 - 2.A.6.1.4
TC HRGMv2_1784_13 HRGMv2_1784_13_107 106417 107802 - 1.B.17.3.4
TF HRGMv2_1784_13 HRGMv2_1784_13_108 107992 108672 + Trans_reg_C
TC HRGMv2_1784_13 HRGMv2_1784_13_109 108665 110140 + 2.A.21.9.1
Gene ID: HRGMv2_1784_13_95
Type: TC
Location: 92327 - 93256 (-)
Gene ID: HRGMv2_1784_13_96
Type: TC
Location: 93261 - 93641 (-)
Gene ID: HRGMv2_1784_13_97
Type: TC
Location: 93681 - 94577 (-)
Gene ID: HRGMv2_1784_13_98
Type: CAZyme
Location: 94577 - 96394 (-)
Gene ID: HRGMv2_1784_13_99
Type:
Location: 96629 - 97078 (+)
Gene ID: HRGMv2_1784_13_100
Type: TC
Location: 97367 - 98104 (+)
Gene ID: HRGMv2_1784_13_101
Type: pfam
Location: 98138 - 98335 (-)
Gene ID: HRGMv2_1784_13_102
Type: TC
Location: 98376 - 100817 (-)
Gene ID: HRGMv2_1784_13_103
Type: pfam
Location: 100945 - 101385 (-)
Gene ID: HRGMv2_1784_13_104
Type: TC
Location: 101472 - 104618 (-)
Gene ID: HRGMv2_1784_13_105
Type: TC
Location: 104629 - 105921 (-)
Gene ID: HRGMv2_1784_13_106
Type: TC
Location: 106035 - 106388 (-)
Gene ID: HRGMv2_1784_13_107
Type: TC
Location: 106417 - 107802 (-)
Gene ID: HRGMv2_1784_13_108
Type: TF
Location: 107992 - 108672 (+)
Gene ID: HRGMv2_1784_13_109
Type: TC
Location: 108665 - 110140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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