Cluster: HRGMv2_1784_CGC32

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1784_10	HRGMv2_1784_10_100	112939	114309	+	2.A.3.1.3
TC	HRGMv2_1784_10	HRGMv2_1784_10_101	114482	115888	+	2.A.2.3.4
CAZyme	HRGMv2_1784_10	HRGMv2_1784_10_102	115888	116838	+	GH43_26
TC	HRGMv2_1784_10	HRGMv2_1784_10_103	116869	117723	-	9.B.125.1.1
pfam	HRGMv2_1784_10	HRGMv2_1784_10_104	117720	118283	-	Amidase_2
pfam	HRGMv2_1784_10	HRGMv2_1784_10_105	118517	119410	+	QRPTase_C \| QRPTase_N
TC	HRGMv2_1784_10	HRGMv2_1784_10_106	119589	120020	+	3.A.15.2.1
TC	HRGMv2_1784_10	HRGMv2_1784_10_107	120031	121416	+	3.A.15.2.1
TC	HRGMv2_1784_10	HRGMv2_1784_10_108	121406	122611	+	3.A.15.2.1

Gene ID: HRGMv2_1784_10_100
Type: TC
Location: 112939 - 114309 (+)

Gene ID: HRGMv2_1784_10_101
Type: TC
Location: 114482 - 115888 (+)

Gene ID: HRGMv2_1784_10_102
Type: CAZyme
Location: 115888 - 116838 (+)

Gene ID: HRGMv2_1784_10_103
Type: TC
Location: 116869 - 117723 (-)

Gene ID: HRGMv2_1784_10_104
Type: pfam
Location: 117720 - 118283 (-)

Gene ID: HRGMv2_1784_10_105
Type: pfam
Location: 118517 - 119410 (+)

Gene ID: HRGMv2_1784_10_106
Type: TC
Location: 119589 - 120020 (+)

Gene ID: HRGMv2_1784_10_107
Type: TC
Location: 120031 - 121416 (+)

Gene ID: HRGMv2_1784_10_108
Type: TC
Location: 121406 - 122611 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1784_10_101	vegetarian > omnivore	1.56921	0.02450
HRGMv2_1784_10_104	vegan > omnivore	2.55101	0.01047
HRGMv2_1784_10_104	vegetarian > omnivore	1.84416	0.03840