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Cluster: HRGMv2_1784_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1784_10 HRGMv2_1784_10_79 86501 87781 - CE4
pfam HRGMv2_1784_10 HRGMv2_1784_10_80 87811 88251 - EIIA-man
TC HRGMv2_1784_10 HRGMv2_1784_10_81 88371 89138 - 3.A.1.105.17
TC HRGMv2_1784_10 HRGMv2_1784_10_82 89138 90064 - 3.A.1.105.17
TC HRGMv2_1784_10 HRGMv2_1784_10_83 90171 90833 + 2.A.53.3.8
STP HRGMv2_1784_10 HRGMv2_1784_10_84 90895 91464 - Pribosyltran
pfam HRGMv2_1784_10 HRGMv2_1784_10_85 91635 94025 + PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
CAZyme HRGMv2_1784_10 HRGMv2_1784_10_86 94116 95741 - AA1
TC HRGMv2_1784_10 HRGMv2_1784_10_87 95876 96235 + 8.A.2.1.3
Gene ID: HRGMv2_1784_10_79
Type: CAZyme
Location: 86501 - 87781 (-)
Gene ID: HRGMv2_1784_10_80
Type: pfam
Location: 87811 - 88251 (-)
Gene ID: HRGMv2_1784_10_81
Type: TC
Location: 88371 - 89138 (-)
Gene ID: HRGMv2_1784_10_82
Type: TC
Location: 89138 - 90064 (-)
Gene ID: HRGMv2_1784_10_83
Type: TC
Location: 90171 - 90833 (+)
Gene ID: HRGMv2_1784_10_84
Type: STP
Location: 90895 - 91464 (-)
Gene ID: HRGMv2_1784_10_85
Type: pfam
Location: 91635 - 94025 (+)
Gene ID: HRGMv2_1784_10_86
Type: CAZyme
Location: 94116 - 95741 (-)
Gene ID: HRGMv2_1784_10_87
Type: TC
Location: 95876 - 96235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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