dbCAN Logo

Cluster: HRGMv2_1784_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_10 HRGMv2_1784_10_41 43610 44410 + 3.A.1.13.1
TC HRGMv2_1784_10 HRGMv2_1784_10_42 44553 45176 + 1.A.62.2.2
pfam HRGMv2_1784_10 HRGMv2_1784_10_43 45234 45578 - Fe-S_biosyn
TC HRGMv2_1784_10 HRGMv2_1784_10_44 45660 47099 - 2.A.49.5.5
pfam HRGMv2_1784_10 HRGMv2_1784_10_45 47257 48537 + Aminotran_3
TC HRGMv2_1784_10 HRGMv2_1784_10_46 48613 50595 - 3.A.1.14.3
TC HRGMv2_1784_10 HRGMv2_1784_10_47 50592 51482 - 3.A.1.14.3
TC HRGMv2_1784_10 HRGMv2_1784_10_48 51482 52279 - 3.A.1.14.3
TC HRGMv2_1784_10 HRGMv2_1784_10_49 52326 54539 - 1.B.14.1.2
CAZyme HRGMv2_1784_10 HRGMv2_1784_10_50 54769 57321 - GT51
NULL(UNKNOWN) HRGMv2_1784_10 HRGMv2_1784_10_51 57472 57669 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1784_10 HRGMv2_1784_10_52 57963 58307 + 8.A.2.1.1
pfam HRGMv2_1784_10 HRGMv2_1784_10_53 58348 58890 - T2SSB
CAZyme HRGMv2_1784_10 HRGMv2_1784_10_54 58979 62260 - CBM41 | GH13_13
TC HRGMv2_1784_10 HRGMv2_1784_10_55 62551 63411 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_56 63412 65394 + 1.B.22.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_57 65391 66884 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_58 66886 68100 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_59 68121 68543 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_60 68543 69061 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_61 69058 69423 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_62 69420 70019 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_63 70016 71002 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_64 70989 72191 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_65 72184 72678 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_66 72668 73408 + 3.A.15.1.1
TC HRGMv2_1784_10 HRGMv2_1784_10_67 73423 74220 + 3.A.15.1.1
Gene ID: HRGMv2_1784_10_41
Type: TC
Location: 43610 - 44410 (+)
Gene ID: HRGMv2_1784_10_42
Type: TC
Location: 44553 - 45176 (+)
Gene ID: HRGMv2_1784_10_43
Type: pfam
Location: 45234 - 45578 (-)
Gene ID: HRGMv2_1784_10_44
Type: TC
Location: 45660 - 47099 (-)
Gene ID: HRGMv2_1784_10_45
Type: pfam
Location: 47257 - 48537 (+)
Gene ID: HRGMv2_1784_10_46
Type: TC
Location: 48613 - 50595 (-)
Gene ID: HRGMv2_1784_10_47
Type: TC
Location: 50592 - 51482 (-)
Gene ID: HRGMv2_1784_10_48
Type: TC
Location: 51482 - 52279 (-)
Gene ID: HRGMv2_1784_10_49
Type: TC
Location: 52326 - 54539 (-)
Gene ID: HRGMv2_1784_10_50
Type: CAZyme
Location: 54769 - 57321 (-)
Gene ID: HRGMv2_1784_10_51
Type:
Location: 57472 - 57669 (-)
Gene ID: HRGMv2_1784_10_52
Type: TC
Location: 57963 - 58307 (+)
Gene ID: HRGMv2_1784_10_53
Type: pfam
Location: 58348 - 58890 (-)
Gene ID: HRGMv2_1784_10_54
Type: CAZyme
Location: 58979 - 62260 (-)
Gene ID: HRGMv2_1784_10_55
Type: TC
Location: 62551 - 63411 (+)
Gene ID: HRGMv2_1784_10_56
Type: TC
Location: 63412 - 65394 (+)
Gene ID: HRGMv2_1784_10_57
Type: TC
Location: 65391 - 66884 (+)
Gene ID: HRGMv2_1784_10_58
Type: TC
Location: 66886 - 68100 (+)
Gene ID: HRGMv2_1784_10_59
Type: TC
Location: 68121 - 68543 (+)
Gene ID: HRGMv2_1784_10_60
Type: TC
Location: 68543 - 69061 (+)
Gene ID: HRGMv2_1784_10_61
Type: TC
Location: 69058 - 69423 (+)
Gene ID: HRGMv2_1784_10_62
Type: TC
Location: 69420 - 70019 (+)
Gene ID: HRGMv2_1784_10_63
Type: TC
Location: 70016 - 71002 (+)
Gene ID: HRGMv2_1784_10_64
Type: TC
Location: 70989 - 72191 (+)
Gene ID: HRGMv2_1784_10_65
Type: TC
Location: 72184 - 72678 (+)
Gene ID: HRGMv2_1784_10_66
Type: TC
Location: 72668 - 73408 (+)
Gene ID: HRGMv2_1784_10_67
Type: TC
Location: 73423 - 74220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1784_10_48 vegetarian > omnivore 1.10913 0.00843
HRGMv2_1784_10_48 vegetarian > vegan 1.37671 0.00883

🧭 Explore Read Mapping of CGC

← Back to Cluster List