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Cluster: HRGMv2_1784_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_9 HRGMv2_1784_9_70 66874 68379 - 2.A.17.1.2
STP HRGMv2_1784_9 HRGMv2_1784_9_71 68980 69615 - HhH-GPD
TC HRGMv2_1784_9 HRGMv2_1784_9_72 69612 70316 - 3.D.6.1.4
TC HRGMv2_1784_9 HRGMv2_1784_9_73 70320 70940 - 3.D.6.1.4
TC HRGMv2_1784_9 HRGMv2_1784_9_74 70950 72002 - 3.D.6.1.4
TC HRGMv2_1784_9 HRGMv2_1784_9_75 72003 74192 - 3.D.6.1.4
TC HRGMv2_1784_9 HRGMv2_1784_9_76 74185 74742 - 3.D.6.1.4
TC HRGMv2_1784_9 HRGMv2_1784_9_77 74765 75346 - 3.D.6.1.4
pfam HRGMv2_1784_9 HRGMv2_1784_9_78 75426 75866 - DUF2569
TF HRGMv2_1784_9 HRGMv2_1784_9_79 75935 76150 - HHA
CAZyme HRGMv2_1784_9 HRGMv2_1784_9_80 76368 77738 - GH1
CAZyme HRGMv2_1784_9 HRGMv2_1784_9_81 78204 79244 + GH109
Gene ID: HRGMv2_1784_9_70
Type: TC
Location: 66874 - 68379 (-)
Gene ID: HRGMv2_1784_9_71
Type: STP
Location: 68980 - 69615 (-)
Gene ID: HRGMv2_1784_9_72
Type: TC
Location: 69612 - 70316 (-)
Gene ID: HRGMv2_1784_9_73
Type: TC
Location: 70320 - 70940 (-)
Gene ID: HRGMv2_1784_9_74
Type: TC
Location: 70950 - 72002 (-)
Gene ID: HRGMv2_1784_9_75
Type: TC
Location: 72003 - 74192 (-)
Gene ID: HRGMv2_1784_9_76
Type: TC
Location: 74185 - 74742 (-)
Gene ID: HRGMv2_1784_9_77
Type: TC
Location: 74765 - 75346 (-)
Gene ID: HRGMv2_1784_9_78
Type: pfam
Location: 75426 - 75866 (-)
Gene ID: HRGMv2_1784_9_79
Type: TF
Location: 75935 - 76150 (-)
Gene ID: HRGMv2_1784_9_80
Type: CAZyme
Location: 76368 - 77738 (-)
Gene ID: HRGMv2_1784_9_81
Type: CAZyme
Location: 78204 - 79244 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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