Cluster: HRGMv2_1784_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1784
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1784_8 | HRGMv2_1784_8_357 | 367809 | 369818 | - | 5.A.1.5.1 |
| NULL(UNKNOWN) | HRGMv2_1784_8 | HRGMv2_1784_8_358 | 369867 | 370226 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1784_8 | HRGMv2_1784_8_359 | 370361 | 371794 | - | GH1 |
| TF | HRGMv2_1784_8 | HRGMv2_1784_8_360 | 371914 | 372642 | - | HTH_6 |
| pfam | HRGMv2_1784_8 | HRGMv2_1784_8_361 | 372692 | 373003 | + | ASCH |
| TC | HRGMv2_1784_8 | HRGMv2_1784_8_362 | 373165 | 373824 | + | 1.C.113.1.10 |
Gene ID: HRGMv2_1784_8_357
Type: TC
Location: 367809 - 369818 (-)
Type: TC
Location: 367809 - 369818 (-)
Gene ID: HRGMv2_1784_8_358
Type:
Location: 369867 - 370226 (-)
Type:
Location: 369867 - 370226 (-)
Gene ID: HRGMv2_1784_8_359
Type: CAZyme
Location: 370361 - 371794 (-)
Type: CAZyme
Location: 370361 - 371794 (-)
Gene ID: HRGMv2_1784_8_360
Type: TF
Location: 371914 - 372642 (-)
Type: TF
Location: 371914 - 372642 (-)
Gene ID: HRGMv2_1784_8_361
Type: pfam
Location: 372692 - 373003 (+)
Type: pfam
Location: 372692 - 373003 (+)
Gene ID: HRGMv2_1784_8_362
Type: TC
Location: 373165 - 373824 (+)
Type: TC
Location: 373165 - 373824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella ornithinolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1784_8_360 | vegetarian > vegan | 2.07911 | 0.01888 |