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Cluster: HRGMv2_1784_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_8 HRGMv2_1784_8_252 261648 262304 + 3.A.1.3.14
TC HRGMv2_1784_8 HRGMv2_1784_8_253 262282 263049 + 3.A.1.3.10
TC HRGMv2_1784_8 HRGMv2_1784_8_254 263086 263859 + 3.A.1.3.28
TF HRGMv2_1784_8 HRGMv2_1784_8_255 263869 264729 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_1784_8 HRGMv2_1784_8_256 264959 266797 + GH154
TC HRGMv2_1784_8 HRGMv2_1784_8_257 266794 268074 + 2.A.1.5.2
CAZyme HRGMv2_1784_8 HRGMv2_1784_8_258 268088 269278 + GH88
Gene ID: HRGMv2_1784_8_252
Type: TC
Location: 261648 - 262304 (+)
Gene ID: HRGMv2_1784_8_253
Type: TC
Location: 262282 - 263049 (+)
Gene ID: HRGMv2_1784_8_254
Type: TC
Location: 263086 - 263859 (+)
Gene ID: HRGMv2_1784_8_255
Type: TF
Location: 263869 - 264729 (-)
Gene ID: HRGMv2_1784_8_256
Type: CAZyme
Location: 264959 - 266797 (+)
Gene ID: HRGMv2_1784_8_257
Type: TC
Location: 266794 - 268074 (+)
Gene ID: HRGMv2_1784_8_258
Type: CAZyme
Location: 268088 - 269278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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