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Cluster: HRGMv2_1784_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1784_8 HRGMv2_1784_8_115 118258 120147 - GH36
pfam HRGMv2_1784_8 HRGMv2_1784_8_116 120242 121114 - F_bP_aldolase
STP HRGMv2_1784_8 HRGMv2_1784_8_117 121127 122284 - SIS | SIS
CAZyme HRGMv2_1784_8 HRGMv2_1784_8_118 122584 123717 - CE9
TC HRGMv2_1784_8 HRGMv2_1784_8_119 123714 124148 - 4.A.6.1.6
TC HRGMv2_1784_8 HRGMv2_1784_8_120 124166 125044 - 4.A.6.1.4
TC HRGMv2_1784_8 HRGMv2_1784_8_121 125034 125813 - 4.A.6.1.4
TC HRGMv2_1784_8 HRGMv2_1784_8_122 125824 126297 - 4.A.6.1.4
Gene ID: HRGMv2_1784_8_115
Type: CAZyme
Location: 118258 - 120147 (-)
Gene ID: HRGMv2_1784_8_116
Type: pfam
Location: 120242 - 121114 (-)
Gene ID: HRGMv2_1784_8_117
Type: STP
Location: 121127 - 122284 (-)
Gene ID: HRGMv2_1784_8_118
Type: CAZyme
Location: 122584 - 123717 (-)
Gene ID: HRGMv2_1784_8_119
Type: TC
Location: 123714 - 124148 (-)
Gene ID: HRGMv2_1784_8_120
Type: TC
Location: 124166 - 125044 (-)
Gene ID: HRGMv2_1784_8_121
Type: TC
Location: 125034 - 125813 (-)
Gene ID: HRGMv2_1784_8_122
Type: TC
Location: 125824 - 126297 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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