Cluster: HRGMv2_1784_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1784
- CGC Family ID: CGCFAM_00314
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1784_4 | HRGMv2_1784_4_301 | 358655 | 359422 | + | 3.A.1.103.1 |
| TC | HRGMv2_1784_4 | HRGMv2_1784_4_302 | 359422 | 360162 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_1784_4 | HRGMv2_1784_4_303 | 360177 | 362069 | + | GT111 | GT8 |
| STP | HRGMv2_1784_4 | HRGMv2_1784_4_304 | 362088 | 363242 | + | Pyr_redox |
| CAZyme | HRGMv2_1784_4 | HRGMv2_1784_4_305 | 363239 | 363910 | + | GT2 |
Gene ID: HRGMv2_1784_4_301
Type: TC
Location: 358655 - 359422 (+)
Type: TC
Location: 358655 - 359422 (+)
Gene ID: HRGMv2_1784_4_302
Type: TC
Location: 359422 - 360162 (+)
Type: TC
Location: 359422 - 360162 (+)
Gene ID: HRGMv2_1784_4_303
Type: CAZyme
Location: 360177 - 362069 (+)
Type: CAZyme
Location: 360177 - 362069 (+)
Gene ID: HRGMv2_1784_4_304
Type: STP
Location: 362088 - 363242 (+)
Type: STP
Location: 362088 - 363242 (+)
Gene ID: HRGMv2_1784_4_305
Type: CAZyme
Location: 363239 - 363910 (+)
Type: CAZyme
Location: 363239 - 363910 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella ornithinolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.