dbCAN Logo

Cluster: HRGMv2_1784_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_4 HRGMv2_1784_4_279 325759 327606 + 9.B.22.2.1
TC HRGMv2_1784_4 HRGMv2_1784_4_280 327741 329330 - 2.A.109.2.3
pfam HRGMv2_1784_4 HRGMv2_1784_4_281 330240 331130 + NTP_transferase
pfam HRGMv2_1784_4 HRGMv2_1784_4_282 331604 332233 + PAP2
TC HRGMv2_1784_4 HRGMv2_1784_4_283 333192 334631 + 1.B.73.1.1
TC HRGMv2_1784_4 HRGMv2_1784_4_284 334765 335898 + 1.B.18.3.8
TC HRGMv2_1784_4 HRGMv2_1784_4_285 336354 338516 + 8.A.3.3.1
TC HRGMv2_1784_4 HRGMv2_1784_4_286 338607 340034 + 9.B.18.1.2
CAZyme HRGMv2_1784_4 HRGMv2_1784_4_287 340074 341162 + GT4
CAZyme HRGMv2_1784_4 HRGMv2_1784_4_288 341425 342327 + GT2
pfam HRGMv2_1784_4 HRGMv2_1784_4_289 342883 343890 + EpsG
CAZyme HRGMv2_1784_4 HRGMv2_1784_4_290 344689 345594 + GT2
pfam HRGMv2_1784_4 HRGMv2_1784_4_291 345644 346411 + TOD1_MUCI70
CAZyme HRGMv2_1784_4 HRGMv2_1784_4_292 346433 347434 + GH39
Gene ID: HRGMv2_1784_4_279
Type: TC
Location: 325759 - 327606 (+)
Gene ID: HRGMv2_1784_4_280
Type: TC
Location: 327741 - 329330 (-)
Gene ID: HRGMv2_1784_4_281
Type: pfam
Location: 330240 - 331130 (+)
Gene ID: HRGMv2_1784_4_282
Type: pfam
Location: 331604 - 332233 (+)
Gene ID: HRGMv2_1784_4_283
Type: TC
Location: 333192 - 334631 (+)
Gene ID: HRGMv2_1784_4_284
Type: TC
Location: 334765 - 335898 (+)
Gene ID: HRGMv2_1784_4_285
Type: TC
Location: 336354 - 338516 (+)
Gene ID: HRGMv2_1784_4_286
Type: TC
Location: 338607 - 340034 (+)
Gene ID: HRGMv2_1784_4_287
Type: CAZyme
Location: 340074 - 341162 (+)
Gene ID: HRGMv2_1784_4_288
Type: CAZyme
Location: 341425 - 342327 (+)
Gene ID: HRGMv2_1784_4_289
Type: pfam
Location: 342883 - 343890 (+)
Gene ID: HRGMv2_1784_4_290
Type: CAZyme
Location: 344689 - 345594 (+)
Gene ID: HRGMv2_1784_4_291
Type: pfam
Location: 345644 - 346411 (+)
Gene ID: HRGMv2_1784_4_292
Type: CAZyme
Location: 346433 - 347434 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List