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Cluster: HRGMv2_1783_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_20 HRGMv2_1783_20_59 59882 61219 - 2.A.40.7.6
pfam HRGMv2_1783_20 HRGMv2_1783_20_60 61387 62052 + Hydrolase | HAD_2
pfam HRGMv2_1783_20 HRGMv2_1783_20_61 62107 62829 - Glucosamine_iso
CAZyme HRGMv2_1783_20 HRGMv2_1783_20_62 62884 64050 - CE1
TC HRGMv2_1783_20 HRGMv2_1783_20_63 64092 65738 - 1.B.3.1.3
pfam HRGMv2_1783_20 HRGMv2_1783_20_64 66323 67048 - PhoU | PhoU
TC HRGMv2_1783_20 HRGMv2_1783_20_65 67098 67871 - 3.A.1.7.1
TC HRGMv2_1783_20 HRGMv2_1783_20_66 67919 68809 - 3.A.1.7.1
TC HRGMv2_1783_20 HRGMv2_1783_20_67 68809 69768 - 3.A.1.7.1
TC HRGMv2_1783_20 HRGMv2_1783_20_68 69961 71001 - 3.A.1.7.1
STP HRGMv2_1783_20 HRGMv2_1783_20_69 71318 73147 - SIS | SIS
pfam HRGMv2_1783_20 HRGMv2_1783_20_70 73330 74700 - Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2
CAZyme HRGMv2_1783_20 HRGMv2_1783_20_71 75046 77217 + PL9_1
TC HRGMv2_1783_20 HRGMv2_1783_20_72 77631 78050 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_73 78071 79453 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_74 79480 80343 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_75 80394 81935 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_76 81948 82481 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_77 82496 82966 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_78 83023 83262 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_79 83310 84125 - 3.A.2.1.1
TC HRGMv2_1783_20 HRGMv2_1783_20_80 84134 84514 - 1.A.77.3.8
Gene ID: HRGMv2_1783_20_59
Type: TC
Location: 59882 - 61219 (-)
Gene ID: HRGMv2_1783_20_60
Type: pfam
Location: 61387 - 62052 (+)
Gene ID: HRGMv2_1783_20_61
Type: pfam
Location: 62107 - 62829 (-)
Gene ID: HRGMv2_1783_20_62
Type: CAZyme
Location: 62884 - 64050 (-)
Gene ID: HRGMv2_1783_20_63
Type: TC
Location: 64092 - 65738 (-)
Gene ID: HRGMv2_1783_20_64
Type: pfam
Location: 66323 - 67048 (-)
Gene ID: HRGMv2_1783_20_65
Type: TC
Location: 67098 - 67871 (-)
Gene ID: HRGMv2_1783_20_66
Type: TC
Location: 67919 - 68809 (-)
Gene ID: HRGMv2_1783_20_67
Type: TC
Location: 68809 - 69768 (-)
Gene ID: HRGMv2_1783_20_68
Type: TC
Location: 69961 - 71001 (-)
Gene ID: HRGMv2_1783_20_69
Type: STP
Location: 71318 - 73147 (-)
Gene ID: HRGMv2_1783_20_70
Type: pfam
Location: 73330 - 74700 (-)
Gene ID: HRGMv2_1783_20_71
Type: CAZyme
Location: 75046 - 77217 (+)
Gene ID: HRGMv2_1783_20_72
Type: TC
Location: 77631 - 78050 (-)
Gene ID: HRGMv2_1783_20_73
Type: TC
Location: 78071 - 79453 (-)
Gene ID: HRGMv2_1783_20_74
Type: TC
Location: 79480 - 80343 (-)
Gene ID: HRGMv2_1783_20_75
Type: TC
Location: 80394 - 81935 (-)
Gene ID: HRGMv2_1783_20_76
Type: TC
Location: 81948 - 82481 (-)
Gene ID: HRGMv2_1783_20_77
Type: TC
Location: 82496 - 82966 (-)
Gene ID: HRGMv2_1783_20_78
Type: TC
Location: 83023 - 83262 (-)
Gene ID: HRGMv2_1783_20_79
Type: TC
Location: 83310 - 84125 (-)
Gene ID: HRGMv2_1783_20_80
Type: TC
Location: 84134 - 84514 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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