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Cluster: HRGMv2_1783_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_19 HRGMv2_1783_19_86 90365 91957 + 4.A.1.1.3
STP HRGMv2_1783_19 HRGMv2_1783_19_87 91991 93178 + Aminotran_1_2
pfam HRGMv2_1783_19 HRGMv2_1783_19_88 93362 93565 + YdfZ
TC HRGMv2_1783_19 HRGMv2_1783_19_89 93754 94965 + 9.B.102.1.1
pfam HRGMv2_1783_19 HRGMv2_1783_19_90 94962 95195 + TusA
TC HRGMv2_1783_19 HRGMv2_1783_19_91 95367 96095 - 3.A.1.24.1
pfam HRGMv2_1783_19 HRGMv2_1783_19_92 96367 97368 + A_deaminase
CAZyme HRGMv2_1783_19 HRGMv2_1783_19_93 97439 98479 - GH109
CAZyme HRGMv2_1783_19 HRGMv2_1783_19_94 98920 100290 + GH1
TF HRGMv2_1783_19 HRGMv2_1783_19_95 100462 100725 + HHA
pfam HRGMv2_1783_19 HRGMv2_1783_19_96 100805 101245 + DUF2569
TC HRGMv2_1783_19 HRGMv2_1783_19_97 101323 101904 + 3.D.6.1.4
TC HRGMv2_1783_19 HRGMv2_1783_19_98 101904 102482 + 3.D.6.1.4
TC HRGMv2_1783_19 HRGMv2_1783_19_99 102475 104382 + 3.D.6.1.4
Gene ID: HRGMv2_1783_19_86
Type: TC
Location: 90365 - 91957 (+)
Gene ID: HRGMv2_1783_19_87
Type: STP
Location: 91991 - 93178 (+)
Gene ID: HRGMv2_1783_19_88
Type: pfam
Location: 93362 - 93565 (+)
Gene ID: HRGMv2_1783_19_89
Type: TC
Location: 93754 - 94965 (+)
Gene ID: HRGMv2_1783_19_90
Type: pfam
Location: 94962 - 95195 (+)
Gene ID: HRGMv2_1783_19_91
Type: TC
Location: 95367 - 96095 (-)
Gene ID: HRGMv2_1783_19_92
Type: pfam
Location: 96367 - 97368 (+)
Gene ID: HRGMv2_1783_19_93
Type: CAZyme
Location: 97439 - 98479 (-)
Gene ID: HRGMv2_1783_19_94
Type: CAZyme
Location: 98920 - 100290 (+)
Gene ID: HRGMv2_1783_19_95
Type: TF
Location: 100462 - 100725 (+)
Gene ID: HRGMv2_1783_19_96
Type: pfam
Location: 100805 - 101245 (+)
Gene ID: HRGMv2_1783_19_97
Type: TC
Location: 101323 - 101904 (+)
Gene ID: HRGMv2_1783_19_98
Type: TC
Location: 101904 - 102482 (+)
Gene ID: HRGMv2_1783_19_99
Type: TC
Location: 102475 - 104382 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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