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Cluster: HRGMv2_1783_CGC80

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_18 HRGMv2_1783_18_79 87651 88340 + 2.A.78.2.3
pfam HRGMv2_1783_18 HRGMv2_1783_18_80 88340 88663 + AzlD
NULL(UNKNOWN) HRGMv2_1783_18 HRGMv2_1783_18_81 88753 89307 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1783_18 HRGMv2_1783_18_82 89304 89741 - 4.A.7.1.1
NULL(UNKNOWN) HRGMv2_1783_18 HRGMv2_1783_18_83 89751 90020 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1783_18 HRGMv2_1783_18_84 90078 90926 - F_bP_aldolase
TC HRGMv2_1783_18 HRGMv2_1783_18_85 90907 92274 - 4.A.7.1.4
pfam HRGMv2_1783_18 HRGMv2_1783_18_86 92267 92581 - PTS_IIB
pfam HRGMv2_1783_18 HRGMv2_1783_18_87 92593 93573 - PFK
TC HRGMv2_1783_18 HRGMv2_1783_18_88 94122 96725 + 3.A.23.1.1
pfam HRGMv2_1783_18 HRGMv2_1783_18_89 96900 97382 + EIIA-man
CAZyme HRGMv2_1783_18 HRGMv2_1783_18_90 97379 98557 + GH88
TC HRGMv2_1783_18 HRGMv2_1783_18_91 98571 99068 + 4.A.6.1.3
TC HRGMv2_1783_18 HRGMv2_1783_18_92 99080 99883 + 4.A.6.1.19
TC HRGMv2_1783_18 HRGMv2_1783_18_93 99876 100718 + 4.A.6.1.19
pfam HRGMv2_1783_18 HRGMv2_1783_18_94 100941 101639 + KdgM
CAZyme HRGMv2_1783_18 HRGMv2_1783_18_95 101686 103197 - CBM91 | GH43_10
pfam HRGMv2_1783_18 HRGMv2_1783_18_96 103343 103555 - YdgH_BhsA-like
pfam HRGMv2_1783_18 HRGMv2_1783_18_97 103684 104520 - FdhD-NarQ
TC HRGMv2_1783_18 HRGMv2_1783_18_98 104677 105264 + 5.A.3.2.1
TC HRGMv2_1783_18 HRGMv2_1783_18_99 105313 107727 + 5.A.3.2.1
Gene ID: HRGMv2_1783_18_79
Type: TC
Location: 87651 - 88340 (+)
Gene ID: HRGMv2_1783_18_80
Type: pfam
Location: 88340 - 88663 (+)
Gene ID: HRGMv2_1783_18_81
Type:
Location: 88753 - 89307 (-)
Gene ID: HRGMv2_1783_18_82
Type: TC
Location: 89304 - 89741 (-)
Gene ID: HRGMv2_1783_18_83
Type:
Location: 89751 - 90020 (-)
Gene ID: HRGMv2_1783_18_84
Type: pfam
Location: 90078 - 90926 (-)
Gene ID: HRGMv2_1783_18_85
Type: TC
Location: 90907 - 92274 (-)
Gene ID: HRGMv2_1783_18_86
Type: pfam
Location: 92267 - 92581 (-)
Gene ID: HRGMv2_1783_18_87
Type: pfam
Location: 92593 - 93573 (-)
Gene ID: HRGMv2_1783_18_88
Type: TC
Location: 94122 - 96725 (+)
Gene ID: HRGMv2_1783_18_89
Type: pfam
Location: 96900 - 97382 (+)
Gene ID: HRGMv2_1783_18_90
Type: CAZyme
Location: 97379 - 98557 (+)
Gene ID: HRGMv2_1783_18_91
Type: TC
Location: 98571 - 99068 (+)
Gene ID: HRGMv2_1783_18_92
Type: TC
Location: 99080 - 99883 (+)
Gene ID: HRGMv2_1783_18_93
Type: TC
Location: 99876 - 100718 (+)
Gene ID: HRGMv2_1783_18_94
Type: pfam
Location: 100941 - 101639 (+)
Gene ID: HRGMv2_1783_18_95
Type: CAZyme
Location: 101686 - 103197 (-)
Gene ID: HRGMv2_1783_18_96
Type: pfam
Location: 103343 - 103555 (-)
Gene ID: HRGMv2_1783_18_97
Type: pfam
Location: 103684 - 104520 (-)
Gene ID: HRGMv2_1783_18_98
Type: TC
Location: 104677 - 105264 (+)
Gene ID: HRGMv2_1783_18_99
Type: TC
Location: 105313 - 107727 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1783_18_82 vegetarian > vegan 5.35760 0.02630

🧭 Explore Read Mapping of CGC

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