dbCAN Logo

Cluster: HRGMv2_1783_CGC76

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_17 HRGMv2_1783_17_87 103274 104356 + 3.A.1.14.16
TC HRGMv2_1783_17 HRGMv2_1783_17_88 104353 105144 + 3.A.1.14.3
STP HRGMv2_1783_17 HRGMv2_1783_17_89 105426 106349 + PfkB
TC HRGMv2_1783_17 HRGMv2_1783_17_90 106514 108031 + 1.B.3.1.2
TC HRGMv2_1783_17 HRGMv2_1783_17_91 108168 109538 + 4.A.1.2.1
CAZyme HRGMv2_1783_17 HRGMv2_1783_17_92 109538 110938 + GH32
TF HRGMv2_1783_17 HRGMv2_1783_17_93 110969 111973 + LacI
pfam HRGMv2_1783_17 HRGMv2_1783_17_94 111975 112814 - PRD | PRD | CAT_RBD
CAZyme HRGMv2_1783_17 HRGMv2_1783_17_95 112811 114235 - GH1
TC HRGMv2_1783_17 HRGMv2_1783_17_96 114232 116112 - 4.A.1.2.11
TC HRGMv2_1783_17 HRGMv2_1783_17_97 116367 117398 - 3.A.1.2.15
TC HRGMv2_1783_17 HRGMv2_1783_17_98 117409 118893 - 3.A.1.2.3
TC HRGMv2_1783_17 HRGMv2_1783_17_99 118918 119841 - 3.A.1.2.15
TF HRGMv2_1783_17 HRGMv2_1783_17_100 120290 121321 - LacI
pfam HRGMv2_1783_17 HRGMv2_1783_17_101 121408 122415 + GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
CAZyme HRGMv2_1783_17 HRGMv2_1783_17_102 122455 123486 - GH109
Gene ID: HRGMv2_1783_17_87
Type: TC
Location: 103274 - 104356 (+)
Gene ID: HRGMv2_1783_17_88
Type: TC
Location: 104353 - 105144 (+)
Gene ID: HRGMv2_1783_17_89
Type: STP
Location: 105426 - 106349 (+)
Gene ID: HRGMv2_1783_17_90
Type: TC
Location: 106514 - 108031 (+)
Gene ID: HRGMv2_1783_17_91
Type: TC
Location: 108168 - 109538 (+)
Gene ID: HRGMv2_1783_17_92
Type: CAZyme
Location: 109538 - 110938 (+)
Gene ID: HRGMv2_1783_17_93
Type: TF
Location: 110969 - 111973 (+)
Gene ID: HRGMv2_1783_17_94
Type: pfam
Location: 111975 - 112814 (-)
Gene ID: HRGMv2_1783_17_95
Type: CAZyme
Location: 112811 - 114235 (-)
Gene ID: HRGMv2_1783_17_96
Type: TC
Location: 114232 - 116112 (-)
Gene ID: HRGMv2_1783_17_97
Type: TC
Location: 116367 - 117398 (-)
Gene ID: HRGMv2_1783_17_98
Type: TC
Location: 117409 - 118893 (-)
Gene ID: HRGMv2_1783_17_99
Type: TC
Location: 118918 - 119841 (-)
Gene ID: HRGMv2_1783_17_100
Type: TF
Location: 120290 - 121321 (-)
Gene ID: HRGMv2_1783_17_101
Type: pfam
Location: 121408 - 122415 (+)
Gene ID: HRGMv2_1783_17_102
Type: CAZyme
Location: 122455 - 123486 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List