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Cluster: HRGMv2_1783_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_17 HRGMv2_1783_17_76 89566 90717 - GH109
pfam HRGMv2_1783_17 HRGMv2_1783_17_77 90714 91742 - AP_endonuc_2
TC HRGMv2_1783_17 HRGMv2_1783_17_78 91759 93000 - 2.A.1.10.4
TC HRGMv2_1783_17 HRGMv2_1783_17_79 93151 94527 - 2.A.3.1.1
TC HRGMv2_1783_17 HRGMv2_1783_17_80 94633 96870 - 1.B.14.1.15
TC HRGMv2_1783_17 HRGMv2_1783_17_81 97212 98165 - 8.A.5.1.6
TC HRGMv2_1783_17 HRGMv2_1783_17_82 98297 99073 - 3.A.1.3.29
Gene ID: HRGMv2_1783_17_76
Type: CAZyme
Location: 89566 - 90717 (-)
Gene ID: HRGMv2_1783_17_77
Type: pfam
Location: 90714 - 91742 (-)
Gene ID: HRGMv2_1783_17_78
Type: TC
Location: 91759 - 93000 (-)
Gene ID: HRGMv2_1783_17_79
Type: TC
Location: 93151 - 94527 (-)
Gene ID: HRGMv2_1783_17_80
Type: TC
Location: 94633 - 96870 (-)
Gene ID: HRGMv2_1783_17_81
Type: TC
Location: 97212 - 98165 (-)
Gene ID: HRGMv2_1783_17_82
Type: TC
Location: 98297 - 99073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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