dbCAN Logo

Cluster: HRGMv2_1783_CGC74

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_17 HRGMv2_1783_17_20 24592 25527 + 3.A.1.2.11
pfam HRGMv2_1783_17 HRGMv2_1783_17_21 25571 26191 + DUF2291
TC HRGMv2_1783_17 HRGMv2_1783_17_22 26193 27737 + 3.A.1.2.11
TC HRGMv2_1783_17 HRGMv2_1783_17_23 27755 28810 + 3.A.1.2.11
pfam HRGMv2_1783_17 HRGMv2_1783_17_24 28871 29668 + adh_short | KR | adh_short_C2 | SDR
pfam HRGMv2_1783_17 HRGMv2_1783_17_25 29774 30559 + adh_short | KR | adh_short_C2
TC HRGMv2_1783_17 HRGMv2_1783_17_26 30754 30906 - 1.E.53.1.6
TC HRGMv2_1783_17 HRGMv2_1783_17_27 31128 33161 - 2.A.15.1.4
STP HRGMv2_1783_17 HRGMv2_1783_17_28 33290 33883 + TetR_N
sulfatase HRGMv2_1783_17 HRGMv2_1783_17_29 33894 35366 + S1_6
CAZyme HRGMv2_1783_17 HRGMv2_1783_17_30 35381 37045 + AA3_2
Gene ID: HRGMv2_1783_17_20
Type: TC
Location: 24592 - 25527 (+)
Gene ID: HRGMv2_1783_17_21
Type: pfam
Location: 25571 - 26191 (+)
Gene ID: HRGMv2_1783_17_22
Type: TC
Location: 26193 - 27737 (+)
Gene ID: HRGMv2_1783_17_23
Type: TC
Location: 27755 - 28810 (+)
Gene ID: HRGMv2_1783_17_24
Type: pfam
Location: 28871 - 29668 (+)
Gene ID: HRGMv2_1783_17_25
Type: pfam
Location: 29774 - 30559 (+)
Gene ID: HRGMv2_1783_17_26
Type: TC
Location: 30754 - 30906 (-)
Gene ID: HRGMv2_1783_17_27
Type: TC
Location: 31128 - 33161 (-)
Gene ID: HRGMv2_1783_17_28
Type: STP
Location: 33290 - 33883 (+)
Gene ID: HRGMv2_1783_17_29
Type: sulfatase
Location: 33894 - 35366 (+)
Gene ID: HRGMv2_1783_17_30
Type: CAZyme
Location: 35381 - 37045 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List