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Cluster: HRGMv2_1783_CGC67

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_13 HRGMv2_1783_13_118 124601 125740 + 2.A.1.2.3
STP HRGMv2_1783_13 HRGMv2_1783_13_119 125713 126942 + Aminotran_1_2
TC HRGMv2_1783_13 HRGMv2_1783_13_120 127032 128192 + 2.A.42.1.4
TC HRGMv2_1783_13 HRGMv2_1783_13_121 128384 131464 - 2.A.6.2.17
TC HRGMv2_1783_13 HRGMv2_1783_13_122 131461 132570 - 2.A.6.2.27
STP HRGMv2_1783_13 HRGMv2_1783_13_123 132646 133260 - TetR_N
TF HRGMv2_1783_13 HRGMv2_1783_13_124 133536 134375 - HTH_AraC
CAZyme HRGMv2_1783_13 HRGMv2_1783_13_125 134576 135883 + GH4
TF HRGMv2_1783_13 HRGMv2_1783_13_126 136067 136429 - HTH_AraC
STP HRGMv2_1783_13 HRGMv2_1783_13_127 136516 137106 - TetR_C | TetR_N
TC HRGMv2_1783_13 HRGMv2_1783_13_128 137271 138707 + 2.A.1.3.21
Gene ID: HRGMv2_1783_13_118
Type: TC
Location: 124601 - 125740 (+)
Gene ID: HRGMv2_1783_13_119
Type: STP
Location: 125713 - 126942 (+)
Gene ID: HRGMv2_1783_13_120
Type: TC
Location: 127032 - 128192 (+)
Gene ID: HRGMv2_1783_13_121
Type: TC
Location: 128384 - 131464 (-)
Gene ID: HRGMv2_1783_13_122
Type: TC
Location: 131461 - 132570 (-)
Gene ID: HRGMv2_1783_13_123
Type: STP
Location: 132646 - 133260 (-)
Gene ID: HRGMv2_1783_13_124
Type: TF
Location: 133536 - 134375 (-)
Gene ID: HRGMv2_1783_13_125
Type: CAZyme
Location: 134576 - 135883 (+)
Gene ID: HRGMv2_1783_13_126
Type: TF
Location: 136067 - 136429 (-)
Gene ID: HRGMv2_1783_13_127
Type: STP
Location: 136516 - 137106 (-)
Gene ID: HRGMv2_1783_13_128
Type: TC
Location: 137271 - 138707 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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