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Cluster: HRGMv2_1783_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_13 HRGMv2_1783_13_69 72366 73298 - CE4
pfam HRGMv2_1783_13 HRGMv2_1783_13_70 73315 74058 - Asp_Glu_race
TF HRGMv2_1783_13 HRGMv2_1783_13_71 74058 74774 - GntR
TC HRGMv2_1783_13 HRGMv2_1783_13_72 74919 76406 + 2.A.39.3.4
peptidase HRGMv2_1783_13 HRGMv2_1783_13_73 76513 77835 + M38.UNW
TC HRGMv2_1783_13 HRGMv2_1783_13_74 77876 78202 - 9.B.35.2.1
pfam HRGMv2_1783_13 HRGMv2_1783_13_75 78199 78699 - OHCU_decarbox
TC HRGMv2_1783_13 HRGMv2_1783_13_76 78677 80059 - 2.A.40.4.3
Gene ID: HRGMv2_1783_13_69
Type: CAZyme
Location: 72366 - 73298 (-)
Gene ID: HRGMv2_1783_13_70
Type: pfam
Location: 73315 - 74058 (-)
Gene ID: HRGMv2_1783_13_71
Type: TF
Location: 74058 - 74774 (-)
Gene ID: HRGMv2_1783_13_72
Type: TC
Location: 74919 - 76406 (+)
Gene ID: HRGMv2_1783_13_73
Type: peptidase
Location: 76513 - 77835 (+)
Gene ID: HRGMv2_1783_13_74
Type: TC
Location: 77876 - 78202 (-)
Gene ID: HRGMv2_1783_13_75
Type: pfam
Location: 78199 - 78699 (-)
Gene ID: HRGMv2_1783_13_76
Type: TC
Location: 78677 - 80059 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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