dbCAN HGM

Cluster: HRGMv2_1783_CGC65

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1783_13	HRGMv2_1783_13_56	59571	60272	+	1.B.35.1.1
CAZyme	HRGMv2_1783_13	HRGMv2_1783_13_57	60341	62050	+	PL2_1
peptidase	HRGMv2_1783_13	HRGMv2_1783_13_58	62132	63364	-	M20.UPW
pfam	HRGMv2_1783_13	HRGMv2_1783_13_59	63391	64632	-	Aminotran_5
TC	HRGMv2_1783_13	HRGMv2_1783_13_60	64643	65383	-	3.A.1.3.21
TC	HRGMv2_1783_13	HRGMv2_1783_13_61	65364	66023	-	3.A.1.3.10
TC	HRGMv2_1783_13	HRGMv2_1783_13_62	66020	66685	-	3.A.1.3.6

Gene ID: HRGMv2_1783_13_56
Type: TC
Location: 59571 - 60272 (+)

Gene ID: HRGMv2_1783_13_57
Type: CAZyme
Location: 60341 - 62050 (+)

Gene ID: HRGMv2_1783_13_58
Type: peptidase
Location: 62132 - 63364 (-)

Gene ID: HRGMv2_1783_13_59
Type: pfam
Location: 63391 - 64632 (-)

Gene ID: HRGMv2_1783_13_60
Type: TC
Location: 64643 - 65383 (-)

Gene ID: HRGMv2_1783_13_61
Type: TC
Location: 65364 - 66023 (-)

Gene ID: HRGMv2_1783_13_62
Type: TC
Location: 66020 - 66685 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1783_13_59	vegetarian > vegan	4.19629	0.01269
HRGMv2_1783_13_60	vegetarian > omnivore	1.44271	0.02053
HRGMv2_1783_13_61	vegan > omnivore	2.06152	0.04865
HRGMv2_1783_13_61	vegetarian > omnivore	3.35202	0.04863