dbCAN Logo

Cluster: HRGMv2_1783_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_11 HRGMv2_1783_11_75 78517 79131 + 2.A.115.2.6
TC HRGMv2_1783_11 HRGMv2_1783_11_76 79224 79577 + 3.A.5.1.1
TC HRGMv2_1783_11 HRGMv2_1783_11_77 79624 80478 - 2.A.113.1.1
pfam HRGMv2_1783_11 HRGMv2_1783_11_78 80646 80918 + Trns_repr_metal
STP HRGMv2_1783_11 HRGMv2_1783_11_79 80921 82507 - EAL
TC HRGMv2_1783_11 HRGMv2_1783_11_80 82751 83860 - 3.A.1.1.4
TC HRGMv2_1783_11 HRGMv2_1783_11_81 84214 85446 + 3.A.1.1.2
TC HRGMv2_1783_11 HRGMv2_1783_11_82 85503 86810 + 3.A.1.1.2
TC HRGMv2_1783_11 HRGMv2_1783_11_83 86821 87672 + 3.A.1.1.2
CAZyme HRGMv2_1783_11 HRGMv2_1783_11_84 87677 88879 + GH53
CAZyme HRGMv2_1783_11 HRGMv2_1783_11_85 88911 90968 + GH42
TC HRGMv2_1783_11 HRGMv2_1783_11_86 91034 91348 + 4.A.1.1.1
TC HRGMv2_1783_11 HRGMv2_1783_11_87 91470 92741 - 1.B.3.1.1
Gene ID: HRGMv2_1783_11_75
Type: TC
Location: 78517 - 79131 (+)
Gene ID: HRGMv2_1783_11_76
Type: TC
Location: 79224 - 79577 (+)
Gene ID: HRGMv2_1783_11_77
Type: TC
Location: 79624 - 80478 (-)
Gene ID: HRGMv2_1783_11_78
Type: pfam
Location: 80646 - 80918 (+)
Gene ID: HRGMv2_1783_11_79
Type: STP
Location: 80921 - 82507 (-)
Gene ID: HRGMv2_1783_11_80
Type: TC
Location: 82751 - 83860 (-)
Gene ID: HRGMv2_1783_11_81
Type: TC
Location: 84214 - 85446 (+)
Gene ID: HRGMv2_1783_11_82
Type: TC
Location: 85503 - 86810 (+)
Gene ID: HRGMv2_1783_11_83
Type: TC
Location: 86821 - 87672 (+)
Gene ID: HRGMv2_1783_11_84
Type: CAZyme
Location: 87677 - 88879 (+)
Gene ID: HRGMv2_1783_11_85
Type: CAZyme
Location: 88911 - 90968 (+)
Gene ID: HRGMv2_1783_11_86
Type: TC
Location: 91034 - 91348 (+)
Gene ID: HRGMv2_1783_11_87
Type: TC
Location: 91470 - 92741 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1783_11_78 vegan > omnivore 13.54548 0.04176
HRGMv2_1783_11_78 vegetarian > omnivore 15.38181 0.00817

🧭 Explore Read Mapping of CGC

← Back to Cluster List