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Cluster: HRGMv2_1783_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_10 HRGMv2_1783_10_102 109715 110188 + 4.A.6.1.4
TC HRGMv2_1783_10 HRGMv2_1783_10_103 110199 110978 + 4.A.6.1.4
TC HRGMv2_1783_10 HRGMv2_1783_10_104 110968 111846 + 4.A.6.1.4
TC HRGMv2_1783_10 HRGMv2_1783_10_105 111864 112298 + 4.A.6.1.16
CAZyme HRGMv2_1783_10 HRGMv2_1783_10_106 112295 113428 + CE9
STP HRGMv2_1783_10 HRGMv2_1783_10_107 113733 114887 + SIS | SIS
pfam HRGMv2_1783_10 HRGMv2_1783_10_108 114900 115772 + F_bP_aldolase
CAZyme HRGMv2_1783_10 HRGMv2_1783_10_109 115871 117760 + GH36
Gene ID: HRGMv2_1783_10_102
Type: TC
Location: 109715 - 110188 (+)
Gene ID: HRGMv2_1783_10_103
Type: TC
Location: 110199 - 110978 (+)
Gene ID: HRGMv2_1783_10_104
Type: TC
Location: 110968 - 111846 (+)
Gene ID: HRGMv2_1783_10_105
Type: TC
Location: 111864 - 112298 (+)
Gene ID: HRGMv2_1783_10_106
Type: CAZyme
Location: 112295 - 113428 (+)
Gene ID: HRGMv2_1783_10_107
Type: STP
Location: 113733 - 114887 (+)
Gene ID: HRGMv2_1783_10_108
Type: pfam
Location: 114900 - 115772 (+)
Gene ID: HRGMv2_1783_10_109
Type: CAZyme
Location: 115871 - 117760 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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