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Cluster: HRGMv2_1783_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_10 HRGMv2_1783_10_70 78318 79661 - 2.A.2.3.5
TF HRGMv2_1783_10 HRGMv2_1783_10_71 79769 80635 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_1783_10 HRGMv2_1783_10_72 80764 82407 + CBM91 | GH43_11
pfam HRGMv2_1783_10 HRGMv2_1783_10_73 82486 82989 + YgjP-like
pfam HRGMv2_1783_10 HRGMv2_1783_10_74 83059 84048 + GFO_IDH_MocA | GFO_IDH_MocA_C3
TC HRGMv2_1783_10 HRGMv2_1783_10_75 84299 85267 + 2.A.109.1.7
TC HRGMv2_1783_10 HRGMv2_1783_10_76 85522 86769 + 2.A.23.4.1
Gene ID: HRGMv2_1783_10_70
Type: TC
Location: 78318 - 79661 (-)
Gene ID: HRGMv2_1783_10_71
Type: TF
Location: 79769 - 80635 (+)
Gene ID: HRGMv2_1783_10_72
Type: CAZyme
Location: 80764 - 82407 (+)
Gene ID: HRGMv2_1783_10_73
Type: pfam
Location: 82486 - 82989 (+)
Gene ID: HRGMv2_1783_10_74
Type: pfam
Location: 83059 - 84048 (+)
Gene ID: HRGMv2_1783_10_75
Type: TC
Location: 84299 - 85267 (+)
Gene ID: HRGMv2_1783_10_76
Type: TC
Location: 85522 - 86769 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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