Cluster: HRGMv2_1783_CGC53
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1783_9 | HRGMv2_1783_9_99 | 101406 | 102902 | - | 9.B.34.1.2 |
| CAZyme | HRGMv2_1783_9 | HRGMv2_1783_9_100 | 103264 | 104421 | + | GT9 |
| pfam | HRGMv2_1783_9 | HRGMv2_1783_9_101 | 104470 | 105753 | - | DUF444 |
| pfam | HRGMv2_1783_9 | HRGMv2_1783_9_102 | 105885 | 107819 | - | PrkA | AAA_PrkA |
| TC | HRGMv2_1783_9 | HRGMv2_1783_9_103 | 108247 | 108993 | + | 9.B.99.1.2 |
| TC | HRGMv2_1783_9 | HRGMv2_1783_9_104 | 109086 | 109940 | + | 8.A.5.1.4 |
Gene ID: HRGMv2_1783_9_99
Type: TC
Location: 101406 - 102902 (-)
Type: TC
Location: 101406 - 102902 (-)
Gene ID: HRGMv2_1783_9_100
Type: CAZyme
Location: 103264 - 104421 (+)
Type: CAZyme
Location: 103264 - 104421 (+)
Gene ID: HRGMv2_1783_9_101
Type: pfam
Location: 104470 - 105753 (-)
Type: pfam
Location: 104470 - 105753 (-)
Gene ID: HRGMv2_1783_9_102
Type: pfam
Location: 105885 - 107819 (-)
Type: pfam
Location: 105885 - 107819 (-)
Gene ID: HRGMv2_1783_9_103
Type: TC
Location: 108247 - 108993 (+)
Type: TC
Location: 108247 - 108993 (+)
Gene ID: HRGMv2_1783_9_104
Type: TC
Location: 109086 - 109940 (+)
Type: TC
Location: 109086 - 109940 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella michiganensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.