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Cluster: HRGMv2_1783_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_7 HRGMv2_1783_7_187 206343 208640 + GH3
TC HRGMv2_1783_7 HRGMv2_1783_7_188 208807 209724 + 3.A.1.12.15
TC HRGMv2_1783_7 HRGMv2_1783_7_189 209732 210889 + 3.A.1.12.15
TC HRGMv2_1783_7 HRGMv2_1783_7_190 210882 211829 + 3.A.1.12.15
TC HRGMv2_1783_7 HRGMv2_1783_7_191 211813 212550 + 3.A.1.12.15
NULL(UNKNOWN) HRGMv2_1783_7 HRGMv2_1783_7_192 212525 212638 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1783_7 HRGMv2_1783_7_193 212920 213678 - MerR
TC HRGMv2_1783_7 HRGMv2_1783_7_194 213889 215577 + 9.B.33.1.1
Gene ID: HRGMv2_1783_7_187
Type: CAZyme
Location: 206343 - 208640 (+)
Gene ID: HRGMv2_1783_7_188
Type: TC
Location: 208807 - 209724 (+)
Gene ID: HRGMv2_1783_7_189
Type: TC
Location: 209732 - 210889 (+)
Gene ID: HRGMv2_1783_7_190
Type: TC
Location: 210882 - 211829 (+)
Gene ID: HRGMv2_1783_7_191
Type: TC
Location: 211813 - 212550 (+)
Gene ID: HRGMv2_1783_7_192
Type:
Location: 212525 - 212638 (-)
Gene ID: HRGMv2_1783_7_193
Type: TF
Location: 212920 - 213678 (-)
Gene ID: HRGMv2_1783_7_194
Type: TC
Location: 213889 - 215577 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1783_7_192 vegetarian > vegan 4.59399 0.03225

🧭 Explore Read Mapping of CGC

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