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Cluster: HRGMv2_1783_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_312 348793 349932 - PL38
TC HRGMv2_1783_1 HRGMv2_1783_1_313 349940 351034 - 3.A.1.1.10
TC HRGMv2_1783_1 HRGMv2_1783_1_314 351045 351884 - 3.A.1.1.39
TC HRGMv2_1783_1 HRGMv2_1783_1_315 351894 352835 - 3.A.1.1.34
STP HRGMv2_1783_1 HRGMv2_1783_1_316 352847 354136 - SBP_bac_1
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_317 354662 355900 + PL38
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_318 355900 357912 + PL17_1
Gene ID: HRGMv2_1783_1_312
Type: CAZyme
Location: 348793 - 349932 (-)
Gene ID: HRGMv2_1783_1_313
Type: TC
Location: 349940 - 351034 (-)
Gene ID: HRGMv2_1783_1_314
Type: TC
Location: 351045 - 351884 (-)
Gene ID: HRGMv2_1783_1_315
Type: TC
Location: 351894 - 352835 (-)
Gene ID: HRGMv2_1783_1_316
Type: STP
Location: 352847 - 354136 (-)
Gene ID: HRGMv2_1783_1_317
Type: CAZyme
Location: 354662 - 355900 (+)
Gene ID: HRGMv2_1783_1_318
Type: CAZyme
Location: 355900 - 357912 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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