dbCAN Logo

Cluster: HRGMv2_1783_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_6 HRGMv2_1783_6_77 71184 72056 + 3.A.1.1.11
TC HRGMv2_1783_6 HRGMv2_1783_6_78 72046 72933 + 3.A.1.1.18
pfam HRGMv2_1783_6 HRGMv2_1783_6_79 72944 73768 + Metallophos | Metallophos_2
TC HRGMv2_1783_6 HRGMv2_1783_6_80 73774 74844 + 3.A.1.1.3
TC HRGMv2_1783_6 HRGMv2_1783_6_81 75044 76354 + 3.A.1.1.3
pfam HRGMv2_1783_6 HRGMv2_1783_6_82 76491 77390 - AP_endonuc_2
pfam HRGMv2_1783_6 HRGMv2_1783_6_83 77415 78299 - AP_endonuc_2
CAZyme HRGMv2_1783_6 HRGMv2_1783_6_84 78341 79354 - GH177
Gene ID: HRGMv2_1783_6_77
Type: TC
Location: 71184 - 72056 (+)
Gene ID: HRGMv2_1783_6_78
Type: TC
Location: 72046 - 72933 (+)
Gene ID: HRGMv2_1783_6_79
Type: pfam
Location: 72944 - 73768 (+)
Gene ID: HRGMv2_1783_6_80
Type: TC
Location: 73774 - 74844 (+)
Gene ID: HRGMv2_1783_6_81
Type: TC
Location: 75044 - 76354 (+)
Gene ID: HRGMv2_1783_6_82
Type: pfam
Location: 76491 - 77390 (-)
Gene ID: HRGMv2_1783_6_83
Type: pfam
Location: 77415 - 78299 (-)
Gene ID: HRGMv2_1783_6_84
Type: CAZyme
Location: 78341 - 79354 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1783_6_83 vegetarian > omnivore 1.85976 0.02053

🧭 Explore Read Mapping of CGC

← Back to Cluster List