Cluster: HRGMv2_1783_CGC34
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_304 | 336959 | 337756 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_305 | 337759 | 338517 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_306 | 338507 | 338992 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_307 | 338985 | 340178 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_308 | 340171 | 341151 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_309 | 341148 | 341744 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_310 | 341741 | 342106 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_311 | 342103 | 342615 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_312 | 342615 | 343037 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_313 | 343058 | 344263 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_314 | 344265 | 345758 | - | 3.A.15.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_315 | 345755 | 347737 | - | 1.B.22.1.1 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_316 | 347738 | 348577 | - | 3.A.15.1.1 |
| CAZyme | HRGMv2_1783_4 | HRGMv2_1783_4_317 | 348930 | 352202 | + | CBM41 | GH13_13 |
| pfam | HRGMv2_1783_4 | HRGMv2_1783_4_318 | 352274 | 352798 | + | T2SSB |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_319 | 352827 | 353204 | - | 8.A.2.1.1 |
| NULL(UNKNOWN) | HRGMv2_1783_4 | HRGMv2_1783_4_320 | 353310 | 353456 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1783_4 | HRGMv2_1783_4_321 | 353776 | 356331 | + | GT51 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_322 | 356606 | 358810 | + | 1.B.14.1.2 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_323 | 358856 | 359653 | + | 3.A.1.14.3 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_324 | 359653 | 360543 | + | 3.A.1.14.3 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_325 | 360540 | 362522 | + | 3.A.1.14.3 |
| pfam | HRGMv2_1783_4 | HRGMv2_1783_4_326 | 362641 | 363921 | - | Aminotran_3 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_327 | 364176 | 365645 | + | 2.A.49.5.5 |
| pfam | HRGMv2_1783_4 | HRGMv2_1783_4_328 | 365727 | 366071 | + | Fe-S_biosyn |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_329 | 366171 | 366794 | - | 1.A.62.2.2 |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_330 | 366977 | 367777 | - | 3.A.1.13.1 |
Gene ID: HRGMv2_1783_4_304
Type: TC
Location: 336959 - 337756 (-)
Type: TC
Location: 336959 - 337756 (-)
Gene ID: HRGMv2_1783_4_305
Type: TC
Location: 337759 - 338517 (-)
Type: TC
Location: 337759 - 338517 (-)
Gene ID: HRGMv2_1783_4_306
Type: TC
Location: 338507 - 338992 (-)
Type: TC
Location: 338507 - 338992 (-)
Gene ID: HRGMv2_1783_4_307
Type: TC
Location: 338985 - 340178 (-)
Type: TC
Location: 338985 - 340178 (-)
Gene ID: HRGMv2_1783_4_308
Type: TC
Location: 340171 - 341151 (-)
Type: TC
Location: 340171 - 341151 (-)
Gene ID: HRGMv2_1783_4_309
Type: TC
Location: 341148 - 341744 (-)
Type: TC
Location: 341148 - 341744 (-)
Gene ID: HRGMv2_1783_4_310
Type: TC
Location: 341741 - 342106 (-)
Type: TC
Location: 341741 - 342106 (-)
Gene ID: HRGMv2_1783_4_311
Type: TC
Location: 342103 - 342615 (-)
Type: TC
Location: 342103 - 342615 (-)
Gene ID: HRGMv2_1783_4_312
Type: TC
Location: 342615 - 343037 (-)
Type: TC
Location: 342615 - 343037 (-)
Gene ID: HRGMv2_1783_4_313
Type: TC
Location: 343058 - 344263 (-)
Type: TC
Location: 343058 - 344263 (-)
Gene ID: HRGMv2_1783_4_314
Type: TC
Location: 344265 - 345758 (-)
Type: TC
Location: 344265 - 345758 (-)
Gene ID: HRGMv2_1783_4_315
Type: TC
Location: 345755 - 347737 (-)
Type: TC
Location: 345755 - 347737 (-)
Gene ID: HRGMv2_1783_4_316
Type: TC
Location: 347738 - 348577 (-)
Type: TC
Location: 347738 - 348577 (-)
Gene ID: HRGMv2_1783_4_317
Type: CAZyme
Location: 348930 - 352202 (+)
Type: CAZyme
Location: 348930 - 352202 (+)
Gene ID: HRGMv2_1783_4_318
Type: pfam
Location: 352274 - 352798 (+)
Type: pfam
Location: 352274 - 352798 (+)
Gene ID: HRGMv2_1783_4_319
Type: TC
Location: 352827 - 353204 (-)
Type: TC
Location: 352827 - 353204 (-)
Gene ID: HRGMv2_1783_4_320
Type:
Location: 353310 - 353456 (-)
Type:
Location: 353310 - 353456 (-)
Gene ID: HRGMv2_1783_4_321
Type: CAZyme
Location: 353776 - 356331 (+)
Type: CAZyme
Location: 353776 - 356331 (+)
Gene ID: HRGMv2_1783_4_322
Type: TC
Location: 356606 - 358810 (+)
Type: TC
Location: 356606 - 358810 (+)
Gene ID: HRGMv2_1783_4_323
Type: TC
Location: 358856 - 359653 (+)
Type: TC
Location: 358856 - 359653 (+)
Gene ID: HRGMv2_1783_4_324
Type: TC
Location: 359653 - 360543 (+)
Type: TC
Location: 359653 - 360543 (+)
Gene ID: HRGMv2_1783_4_325
Type: TC
Location: 360540 - 362522 (+)
Type: TC
Location: 360540 - 362522 (+)
Gene ID: HRGMv2_1783_4_326
Type: pfam
Location: 362641 - 363921 (-)
Type: pfam
Location: 362641 - 363921 (-)
Gene ID: HRGMv2_1783_4_327
Type: TC
Location: 364176 - 365645 (+)
Type: TC
Location: 364176 - 365645 (+)
Gene ID: HRGMv2_1783_4_328
Type: pfam
Location: 365727 - 366071 (+)
Type: pfam
Location: 365727 - 366071 (+)
Gene ID: HRGMv2_1783_4_329
Type: TC
Location: 366171 - 366794 (-)
Type: TC
Location: 366171 - 366794 (-)
Gene ID: HRGMv2_1783_4_330
Type: TC
Location: 366977 - 367777 (-)
Type: TC
Location: 366977 - 367777 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella michiganensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.