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Cluster: HRGMv2_1783_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_4 HRGMv2_1783_4_285 317527 317886 - 8.A.2.1.3
CAZyme HRGMv2_1783_4 HRGMv2_1783_4_286 318021 319622 + AA1
pfam HRGMv2_1783_4 HRGMv2_1783_4_287 319723 322113 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
STP HRGMv2_1783_4 HRGMv2_1783_4_288 322284 322853 + Pribosyltran
TC HRGMv2_1783_4 HRGMv2_1783_4_289 322905 323567 - 2.A.53.3.8
TC HRGMv2_1783_4 HRGMv2_1783_4_290 323675 324601 + 3.A.1.105.17
TC HRGMv2_1783_4 HRGMv2_1783_4_291 324598 325368 + 3.A.1.105.17
pfam HRGMv2_1783_4 HRGMv2_1783_4_292 325490 325930 + EIIA-man
CAZyme HRGMv2_1783_4 HRGMv2_1783_4_293 325988 327241 + CE4
Gene ID: HRGMv2_1783_4_285
Type: TC
Location: 317527 - 317886 (-)
Gene ID: HRGMv2_1783_4_286
Type: CAZyme
Location: 318021 - 319622 (+)
Gene ID: HRGMv2_1783_4_287
Type: pfam
Location: 319723 - 322113 (-)
Gene ID: HRGMv2_1783_4_288
Type: STP
Location: 322284 - 322853 (+)
Gene ID: HRGMv2_1783_4_289
Type: TC
Location: 322905 - 323567 (-)
Gene ID: HRGMv2_1783_4_290
Type: TC
Location: 323675 - 324601 (+)
Gene ID: HRGMv2_1783_4_291
Type: TC
Location: 324598 - 325368 (+)
Gene ID: HRGMv2_1783_4_292
Type: pfam
Location: 325490 - 325930 (+)
Gene ID: HRGMv2_1783_4_293
Type: CAZyme
Location: 325988 - 327241 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1783_4_285 vegetarian > omnivore 3.00501 0.00561
HRGMv2_1783_4_285 vegetarian > vegan 4.96043 0.00574

🧭 Explore Read Mapping of CGC

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