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Cluster: HRGMv2_1783_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_4 HRGMv2_1783_4_259 285205 286410 - 3.A.15.2.1
TC HRGMv2_1783_4 HRGMv2_1783_4_260 286400 287785 - 3.A.15.2.1
TC HRGMv2_1783_4 HRGMv2_1783_4_261 287796 288227 - 3.A.15.2.1
pfam HRGMv2_1783_4 HRGMv2_1783_4_262 288411 289304 - QRPTase_C | QRPTase_N
pfam HRGMv2_1783_4 HRGMv2_1783_4_263 289505 290056 + Amidase_2
TC HRGMv2_1783_4 HRGMv2_1783_4_264 290066 290920 + 9.B.125.1.1
CAZyme HRGMv2_1783_4 HRGMv2_1783_4_265 290952 291902 - GH43_26
TC HRGMv2_1783_4 HRGMv2_1783_4_266 291902 293308 - 2.A.2.3.4
TC HRGMv2_1783_4 HRGMv2_1783_4_267 293485 294852 - 2.A.3.1.3
Gene ID: HRGMv2_1783_4_259
Type: TC
Location: 285205 - 286410 (-)
Gene ID: HRGMv2_1783_4_260
Type: TC
Location: 286400 - 287785 (-)
Gene ID: HRGMv2_1783_4_261
Type: TC
Location: 287796 - 288227 (-)
Gene ID: HRGMv2_1783_4_262
Type: pfam
Location: 288411 - 289304 (-)
Gene ID: HRGMv2_1783_4_263
Type: pfam
Location: 289505 - 290056 (+)
Gene ID: HRGMv2_1783_4_264
Type: TC
Location: 290066 - 290920 (+)
Gene ID: HRGMv2_1783_4_265
Type: CAZyme
Location: 290952 - 291902 (-)
Gene ID: HRGMv2_1783_4_266
Type: TC
Location: 291902 - 293308 (-)
Gene ID: HRGMv2_1783_4_267
Type: TC
Location: 293485 - 294852 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1783_4_264 vegetarian > omnivore 1.52026 0.03862

🧭 Explore Read Mapping of CGC

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