Cluster: HRGMv2_1783_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1783
- CGC Family ID: CGCFAM_06063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1783_4 | HRGMv2_1783_4_158 | 164507 | 165040 | - | GH108 |
| TF | HRGMv2_1783_4 | HRGMv2_1783_4_159 | 165077 | 165499 | - | Trans_reg_C |
| NULL(UNKNOWN) | HRGMv2_1783_4 | HRGMv2_1783_4_160 | 165496 | 165627 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1783_4 | HRGMv2_1783_4_161 | 165875 | 167941 | + | GH18 |
| NULL(UNKNOWN) | HRGMv2_1783_4 | HRGMv2_1783_4_162 | 168133 | 168447 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1783_4 | HRGMv2_1783_4_163 | 168612 | 169787 | + | 2.A.33.1.1 |
Gene ID: HRGMv2_1783_4_158
Type: CAZyme
Location: 164507 - 165040 (-)
Type: CAZyme
Location: 164507 - 165040 (-)
Gene ID: HRGMv2_1783_4_159
Type: TF
Location: 165077 - 165499 (-)
Type: TF
Location: 165077 - 165499 (-)
Gene ID: HRGMv2_1783_4_160
Type:
Location: 165496 - 165627 (-)
Type:
Location: 165496 - 165627 (-)
Gene ID: HRGMv2_1783_4_161
Type: CAZyme
Location: 165875 - 167941 (+)
Type: CAZyme
Location: 165875 - 167941 (+)
Gene ID: HRGMv2_1783_4_162
Type:
Location: 168133 - 168447 (+)
Type:
Location: 168133 - 168447 (+)
Gene ID: HRGMv2_1783_4_163
Type: TC
Location: 168612 - 169787 (+)
Type: TC
Location: 168612 - 169787 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella michiganensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.