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Cluster: HRGMv2_1783_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_3 HRGMv2_1783_3_243 272730 273713 + GT2
pfam HRGMv2_1783_3 HRGMv2_1783_3_244 273710 275695 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam HRGMv2_1783_3 HRGMv2_1783_3_245 275692 276594 + Polysacc_deac_1
CAZyme HRGMv2_1783_3 HRGMv2_1783_3_246 276594 278249 + GT83
TC HRGMv2_1783_3 HRGMv2_1783_3_247 278246 278584 + 2.A.7.22.2
TC HRGMv2_1783_3 HRGMv2_1783_3_248 278584 278967 + 2.A.7.22.1
TC HRGMv2_1783_3 HRGMv2_1783_3_249 278964 280013 - 2.A.86.1.2
TC HRGMv2_1783_3 HRGMv2_1783_3_250 280146 281366 + 2.A.1.46.7
pfam HRGMv2_1783_3 HRGMv2_1783_3_251 281367 281924 - DcrB
TC HRGMv2_1783_3 HRGMv2_1783_3_252 281998 282663 - 2.A.88.8.6
pfam HRGMv2_1783_3 HRGMv2_1783_3_253 282830 283075 + TusA
TC HRGMv2_1783_3 HRGMv2_1783_3_254 283154 285358 - 3.A.3.6.2
Gene ID: HRGMv2_1783_3_243
Type: CAZyme
Location: 272730 - 273713 (+)
Gene ID: HRGMv2_1783_3_244
Type: pfam
Location: 273710 - 275695 (+)
Gene ID: HRGMv2_1783_3_245
Type: pfam
Location: 275692 - 276594 (+)
Gene ID: HRGMv2_1783_3_246
Type: CAZyme
Location: 276594 - 278249 (+)
Gene ID: HRGMv2_1783_3_247
Type: TC
Location: 278246 - 278584 (+)
Gene ID: HRGMv2_1783_3_248
Type: TC
Location: 278584 - 278967 (+)
Gene ID: HRGMv2_1783_3_249
Type: TC
Location: 278964 - 280013 (-)
Gene ID: HRGMv2_1783_3_250
Type: TC
Location: 280146 - 281366 (+)
Gene ID: HRGMv2_1783_3_251
Type: pfam
Location: 281367 - 281924 (-)
Gene ID: HRGMv2_1783_3_252
Type: TC
Location: 281998 - 282663 (-)
Gene ID: HRGMv2_1783_3_253
Type: pfam
Location: 282830 - 283075 (+)
Gene ID: HRGMv2_1783_3_254
Type: TC
Location: 283154 - 285358 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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