Cluster: HRGMv2_1783_CGC25
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1783
- CGC Family ID: CGCFAM_00447
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1783_3 | HRGMv2_1783_3_184 | 200826 | 203444 | + | GT2 |
| TC | HRGMv2_1783_3 | HRGMv2_1783_3_185 | 203455 | 205788 | + | 4.D.3.1.6 |
| CAZyme | HRGMv2_1783_3 | HRGMv2_1783_3_186 | 205792 | 206901 | + | GH8 |
| TC | HRGMv2_1783_3 | HRGMv2_1783_3_187 | 206883 | 210368 | + | 1.B.55.3.1 |
| NULL(UNKNOWN) | HRGMv2_1783_3 | HRGMv2_1783_3_188 | 210383 | 210595 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_1783_3 | HRGMv2_1783_3_189 | 210794 | 212920 | + | EAL | GGDEF |
| TC | HRGMv2_1783_3 | HRGMv2_1783_3_190 | 213075 | 214361 | + | 2.A.23.1.7 |
| peptidase | HRGMv2_1783_3 | HRGMv2_1783_3_191 | 214583 | 216088 | + | M16.UNW |
| STP | HRGMv2_1783_3 | HRGMv2_1783_3_192 | 216186 | 217115 | - | PfkB |
| TC | HRGMv2_1783_3 | HRGMv2_1783_3_193 | 217311 | 219362 | + | 9.B.121.1.1 |
| TC | HRGMv2_1783_3 | HRGMv2_1783_3_194 | 219414 | 220736 | - | 2.A.1.6.10 |
| TC | HRGMv2_1783_3 | HRGMv2_1783_3_195 | 221007 | 222038 | - | 9.B.126.1.1 |
Gene ID: HRGMv2_1783_3_184
Type: CAZyme
Location: 200826 - 203444 (+)
Type: CAZyme
Location: 200826 - 203444 (+)
Gene ID: HRGMv2_1783_3_185
Type: TC
Location: 203455 - 205788 (+)
Type: TC
Location: 203455 - 205788 (+)
Gene ID: HRGMv2_1783_3_186
Type: CAZyme
Location: 205792 - 206901 (+)
Type: CAZyme
Location: 205792 - 206901 (+)
Gene ID: HRGMv2_1783_3_187
Type: TC
Location: 206883 - 210368 (+)
Type: TC
Location: 206883 - 210368 (+)
Gene ID: HRGMv2_1783_3_188
Type:
Location: 210383 - 210595 (-)
Type:
Location: 210383 - 210595 (-)
Gene ID: HRGMv2_1783_3_189
Type: STP
Location: 210794 - 212920 (+)
Type: STP
Location: 210794 - 212920 (+)
Gene ID: HRGMv2_1783_3_190
Type: TC
Location: 213075 - 214361 (+)
Type: TC
Location: 213075 - 214361 (+)
Gene ID: HRGMv2_1783_3_191
Type: peptidase
Location: 214583 - 216088 (+)
Type: peptidase
Location: 214583 - 216088 (+)
Gene ID: HRGMv2_1783_3_192
Type: STP
Location: 216186 - 217115 (-)
Type: STP
Location: 216186 - 217115 (-)
Gene ID: HRGMv2_1783_3_193
Type: TC
Location: 217311 - 219362 (+)
Type: TC
Location: 217311 - 219362 (+)
Gene ID: HRGMv2_1783_3_194
Type: TC
Location: 219414 - 220736 (-)
Type: TC
Location: 219414 - 220736 (-)
Gene ID: HRGMv2_1783_3_195
Type: TC
Location: 221007 - 222038 (-)
Type: TC
Location: 221007 - 222038 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella michiganensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.