dbCAN Logo

Cluster: HRGMv2_1783_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_3 HRGMv2_1783_3_132 137654 138142 + 5.A.3.11.1
STP HRGMv2_1783_3 HRGMv2_1783_3_133 138293 139549 - Aminotran_1_2
CAZyme HRGMv2_1783_3 HRGMv2_1783_3_134 139724 141754 - GH13_19
CAZyme HRGMv2_1783_3 HRGMv2_1783_3_135 142334 142897 + GH73
TF HRGMv2_1783_3 HRGMv2_1783_3_136 142958 144136 - HTH_AraC | HTH_AraC
TC HRGMv2_1783_3 HRGMv2_1783_3_137 144259 145440 - 3.A.1.2.4
TC HRGMv2_1783_3 HRGMv2_1783_3_138 145418 146959 - 3.A.1.2.4
TC HRGMv2_1783_3 HRGMv2_1783_3_139 147024 148016 - 3.A.1.2.4
NULL(UNKNOWN) HRGMv2_1783_3 HRGMv2_1783_3_140 148391 149713 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1783_3 HRGMv2_1783_3_141 149810 151264 + FGGY_N | FGGY_C
TC HRGMv2_1783_3 HRGMv2_1783_3_142 151433 151813 + 9.B.44.1.1
TC HRGMv2_1783_3 HRGMv2_1783_3_143 151810 152805 - 9.B.97.1.1
Gene ID: HRGMv2_1783_3_132
Type: TC
Location: 137654 - 138142 (+)
Gene ID: HRGMv2_1783_3_133
Type: STP
Location: 138293 - 139549 (-)
Gene ID: HRGMv2_1783_3_134
Type: CAZyme
Location: 139724 - 141754 (-)
Gene ID: HRGMv2_1783_3_135
Type: CAZyme
Location: 142334 - 142897 (+)
Gene ID: HRGMv2_1783_3_136
Type: TF
Location: 142958 - 144136 (-)
Gene ID: HRGMv2_1783_3_137
Type: TC
Location: 144259 - 145440 (-)
Gene ID: HRGMv2_1783_3_138
Type: TC
Location: 145418 - 146959 (-)
Gene ID: HRGMv2_1783_3_139
Type: TC
Location: 147024 - 148016 (-)
Gene ID: HRGMv2_1783_3_140
Type:
Location: 148391 - 149713 (+)
Gene ID: HRGMv2_1783_3_141
Type: pfam
Location: 149810 - 151264 (+)
Gene ID: HRGMv2_1783_3_142
Type: TC
Location: 151433 - 151813 (+)
Gene ID: HRGMv2_1783_3_143
Type: TC
Location: 151810 - 152805 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List