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Cluster: HRGMv2_1783_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_3 HRGMv2_1783_3_45 45924 47303 - GH4
TC HRGMv2_1783_3 HRGMv2_1783_3_46 47317 48876 - 4.A.1.1.16
pfam HRGMv2_1783_3 HRGMv2_1783_3_47 49191 50906 - AsmA
TC HRGMv2_1783_3 HRGMv2_1783_3_48 51052 52443 - 2.A.40.4.2
TC HRGMv2_1783_3 HRGMv2_1783_3_49 52730 53932 + 2.A.27.1.1
pfam HRGMv2_1783_3 HRGMv2_1783_3_50 54147 55658 - FGGY_N | FGGY_C
TC HRGMv2_1783_3 HRGMv2_1783_3_51 55680 56531 - 1.A.8.1.1
pfam HRGMv2_1783_3 HRGMv2_1783_3_52 56980 57219 + ZapB
TC HRGMv2_1783_3 HRGMv2_1783_3_53 57370 58359 + 3.A.1.6.1
Gene ID: HRGMv2_1783_3_45
Type: CAZyme
Location: 45924 - 47303 (-)
Gene ID: HRGMv2_1783_3_46
Type: TC
Location: 47317 - 48876 (-)
Gene ID: HRGMv2_1783_3_47
Type: pfam
Location: 49191 - 50906 (-)
Gene ID: HRGMv2_1783_3_48
Type: TC
Location: 51052 - 52443 (-)
Gene ID: HRGMv2_1783_3_49
Type: TC
Location: 52730 - 53932 (+)
Gene ID: HRGMv2_1783_3_50
Type: pfam
Location: 54147 - 55658 (-)
Gene ID: HRGMv2_1783_3_51
Type: TC
Location: 55680 - 56531 (-)
Gene ID: HRGMv2_1783_3_52
Type: pfam
Location: 56980 - 57219 (+)
Gene ID: HRGMv2_1783_3_53
Type: TC
Location: 57370 - 58359 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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