dbCAN Logo

Cluster: HRGMv2_1783_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1783_2 HRGMv2_1783_2_271 292401 293810 - 2.A.1.1.115
NULL(UNKNOWN) HRGMv2_1783_2 HRGMv2_1783_2_272 294098 294628 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1783_2 HRGMv2_1783_2_273 295053 295736 + 9.B.20.1.1
TC HRGMv2_1783_2 HRGMv2_1783_2_274 295892 298624 + 3.A.3.4.1
NULL(UNKNOWN) HRGMv2_1783_2 HRGMv2_1783_2_275 298643 298735 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1783_2 HRGMv2_1783_2_276 298886 301069 - AA2
TF HRGMv2_1783_2 HRGMv2_1783_2_277 301335 302267 - HTH_1
TC HRGMv2_1783_2 HRGMv2_1783_2_278 302367 302801 + 2.A.7.21.5
TC HRGMv2_1783_2 HRGMv2_1783_2_279 302811 303278 + 2.A.7.21.5
Gene ID: HRGMv2_1783_2_271
Type: TC
Location: 292401 - 293810 (-)
Gene ID: HRGMv2_1783_2_272
Type:
Location: 294098 - 294628 (+)
Gene ID: HRGMv2_1783_2_273
Type: TC
Location: 295053 - 295736 (+)
Gene ID: HRGMv2_1783_2_274
Type: TC
Location: 295892 - 298624 (+)
Gene ID: HRGMv2_1783_2_275
Type:
Location: 298643 - 298735 (+)
Gene ID: HRGMv2_1783_2_276
Type: CAZyme
Location: 298886 - 301069 (-)
Gene ID: HRGMv2_1783_2_277
Type: TF
Location: 301335 - 302267 (-)
Gene ID: HRGMv2_1783_2_278
Type: TC
Location: 302367 - 302801 (+)
Gene ID: HRGMv2_1783_2_279
Type: TC
Location: 302811 - 303278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List