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Cluster: HRGMv2_1783_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_554 612452 613456 - GH39
TC HRGMv2_1783_1 HRGMv2_1783_1_555 613493 614923 - 9.B.18.1.2
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_556 615071 616222 - GT4
pfam HRGMv2_1783_1 HRGMv2_1783_1_557 616302 617678 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_1783_1 HRGMv2_1783_1_558 617695 619119 - NTP_transferase | MannoseP_isomer | Cupin_2 | ManC_GMP_beta-helix
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_559 619181 619921 - GT25
pfam HRGMv2_1783_1 HRGMv2_1783_1_560 619960 620925 - EpsG
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_561 620968 621933 - GT2
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_562 621949 622941 - GT4
TC HRGMv2_1783_1 HRGMv2_1783_1_563 623038 625206 - 8.A.3.3.1
TC HRGMv2_1783_1 HRGMv2_1783_1_564 625659 626798 - 1.B.18.3.8
TC HRGMv2_1783_1 HRGMv2_1783_1_565 626871 628310 - 1.B.73.1.1
pfam HRGMv2_1783_1 HRGMv2_1783_1_566 629310 629939 - PAP2
pfam HRGMv2_1783_1 HRGMv2_1783_1_567 630414 631262 - NTP_transferase
TC HRGMv2_1783_1 HRGMv2_1783_1_568 632287 633873 + 2.A.109.2.3
TC HRGMv2_1783_1 HRGMv2_1783_1_569 634113 635960 - 9.B.22.2.1
Gene ID: HRGMv2_1783_1_554
Type: CAZyme
Location: 612452 - 613456 (-)
Gene ID: HRGMv2_1783_1_555
Type: TC
Location: 613493 - 614923 (-)
Gene ID: HRGMv2_1783_1_556
Type: CAZyme
Location: 615071 - 616222 (-)
Gene ID: HRGMv2_1783_1_557
Type: pfam
Location: 616302 - 617678 (-)
Gene ID: HRGMv2_1783_1_558
Type: pfam
Location: 617695 - 619119 (-)
Gene ID: HRGMv2_1783_1_559
Type: CAZyme
Location: 619181 - 619921 (-)
Gene ID: HRGMv2_1783_1_560
Type: pfam
Location: 619960 - 620925 (-)
Gene ID: HRGMv2_1783_1_561
Type: CAZyme
Location: 620968 - 621933 (-)
Gene ID: HRGMv2_1783_1_562
Type: CAZyme
Location: 621949 - 622941 (-)
Gene ID: HRGMv2_1783_1_563
Type: TC
Location: 623038 - 625206 (-)
Gene ID: HRGMv2_1783_1_564
Type: TC
Location: 625659 - 626798 (-)
Gene ID: HRGMv2_1783_1_565
Type: TC
Location: 626871 - 628310 (-)
Gene ID: HRGMv2_1783_1_566
Type: pfam
Location: 629310 - 629939 (-)
Gene ID: HRGMv2_1783_1_567
Type: pfam
Location: 630414 - 631262 (-)
Gene ID: HRGMv2_1783_1_568
Type: TC
Location: 632287 - 633873 (+)
Gene ID: HRGMv2_1783_1_569
Type: TC
Location: 634113 - 635960 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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