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Cluster: HRGMv2_1783_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_540 593411 594730 - GT2
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_541 594862 595995 - GT4
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_542 596008 596901 - GT2
pfam HRGMv2_1783_1 HRGMv2_1783_1_543 596898 598052 - DAO | Amino_oxidase | GLF | NAD_binding_8 | NAD_binding_9
CAZyme HRGMv2_1783_1 HRGMv2_1783_1_544 598071 599963 - GT111 | GT8
TC HRGMv2_1783_1 HRGMv2_1783_1_545 599977 600717 - 3.A.1.103.1
TC HRGMv2_1783_1 HRGMv2_1783_1_546 600717 601484 - 3.A.1.103.1
Gene ID: HRGMv2_1783_1_540
Type: CAZyme
Location: 593411 - 594730 (-)
Gene ID: HRGMv2_1783_1_541
Type: CAZyme
Location: 594862 - 595995 (-)
Gene ID: HRGMv2_1783_1_542
Type: CAZyme
Location: 596008 - 596901 (-)
Gene ID: HRGMv2_1783_1_543
Type: pfam
Location: 596898 - 598052 (-)
Gene ID: HRGMv2_1783_1_544
Type: CAZyme
Location: 598071 - 599963 (-)
Gene ID: HRGMv2_1783_1_545
Type: TC
Location: 599977 - 600717 (-)
Gene ID: HRGMv2_1783_1_546
Type: TC
Location: 600717 - 601484 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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