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Cluster: HRGMv2_1781_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1781_1 HRGMv2_1781_1_380 390154 391086 - CE4
pfam HRGMv2_1781_1 HRGMv2_1781_1_381 391103 391846 - Asp_Glu_race
TF HRGMv2_1781_1 HRGMv2_1781_1_382 391846 392562 - GntR
TC HRGMv2_1781_1 HRGMv2_1781_1_383 392707 394194 + 2.A.39.3.4
peptidase HRGMv2_1781_1 HRGMv2_1781_1_384 394301 395623 + M38.UNW
TC HRGMv2_1781_1 HRGMv2_1781_1_385 395665 395991 - 9.B.35.2.1
pfam HRGMv2_1781_1 HRGMv2_1781_1_386 395988 396488 - OHCU_decarbox
TC HRGMv2_1781_1 HRGMv2_1781_1_387 396466 397848 - 2.A.40.4.3
Gene ID: HRGMv2_1781_1_380
Type: CAZyme
Location: 390154 - 391086 (-)
Gene ID: HRGMv2_1781_1_381
Type: pfam
Location: 391103 - 391846 (-)
Gene ID: HRGMv2_1781_1_382
Type: TF
Location: 391846 - 392562 (-)
Gene ID: HRGMv2_1781_1_383
Type: TC
Location: 392707 - 394194 (+)
Gene ID: HRGMv2_1781_1_384
Type: peptidase
Location: 394301 - 395623 (+)
Gene ID: HRGMv2_1781_1_385
Type: TC
Location: 395665 - 395991 (-)
Gene ID: HRGMv2_1781_1_386
Type: pfam
Location: 395988 - 396488 (-)
Gene ID: HRGMv2_1781_1_387
Type: TC
Location: 396466 - 397848 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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