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Cluster: HRGMv2_1781_CGC89

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1781_35 HRGMv2_1781_35_6 4765 6654 - GH36
pfam HRGMv2_1781_35 HRGMv2_1781_35_7 6755 7627 - F_bP_aldolase
STP HRGMv2_1781_35 HRGMv2_1781_35_8 7640 8794 - SIS | SIS
CAZyme HRGMv2_1781_35 HRGMv2_1781_35_9 9096 10226 - CE9
TC HRGMv2_1781_35 HRGMv2_1781_35_10 10223 10657 - 4.A.6.1.16
TC HRGMv2_1781_35 HRGMv2_1781_35_11 10675 11553 - 4.A.6.1.4
TC HRGMv2_1781_35 HRGMv2_1781_35_12 11543 12322 - 4.A.6.1.4
TC HRGMv2_1781_35 HRGMv2_1781_35_13 12333 12806 - 4.A.6.1.4
Gene ID: HRGMv2_1781_35_6
Type: CAZyme
Location: 4765 - 6654 (-)
Gene ID: HRGMv2_1781_35_7
Type: pfam
Location: 6755 - 7627 (-)
Gene ID: HRGMv2_1781_35_8
Type: STP
Location: 7640 - 8794 (-)
Gene ID: HRGMv2_1781_35_9
Type: CAZyme
Location: 9096 - 10226 (-)
Gene ID: HRGMv2_1781_35_10
Type: TC
Location: 10223 - 10657 (-)
Gene ID: HRGMv2_1781_35_11
Type: TC
Location: 10675 - 11553 (-)
Gene ID: HRGMv2_1781_35_12
Type: TC
Location: 11543 - 12322 (-)
Gene ID: HRGMv2_1781_35_13
Type: TC
Location: 12333 - 12806 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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