dbCAN Logo

Cluster: HRGMv2_1781_CGC86

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_28 HRGMv2_1781_28_38 41640 42935 + 2.A.1.6.7
pfam HRGMv2_1781_28 HRGMv2_1781_28_39 42988 43320 - YbfN
TC HRGMv2_1781_28 HRGMv2_1781_28_40 43367 44770 - 1.B.25.1.13
pfam HRGMv2_1781_28 HRGMv2_1781_28_41 45207 46874 - tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC HRGMv2_1781_28 HRGMv2_1781_28_42 47053 49005 - 4.A.1.1.2
pfam HRGMv2_1781_28 HRGMv2_1781_28_43 49318 50118 + Glucosamine_iso
CAZyme HRGMv2_1781_28 HRGMv2_1781_28_44 50179 51327 + CE9
Gene ID: HRGMv2_1781_28_38
Type: TC
Location: 41640 - 42935 (+)
Gene ID: HRGMv2_1781_28_39
Type: pfam
Location: 42988 - 43320 (-)
Gene ID: HRGMv2_1781_28_40
Type: TC
Location: 43367 - 44770 (-)
Gene ID: HRGMv2_1781_28_41
Type: pfam
Location: 45207 - 46874 (-)
Gene ID: HRGMv2_1781_28_42
Type: TC
Location: 47053 - 49005 (-)
Gene ID: HRGMv2_1781_28_43
Type: pfam
Location: 49318 - 50118 (+)
Gene ID: HRGMv2_1781_28_44
Type: CAZyme
Location: 50179 - 51327 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List