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Cluster: HRGMv2_1781_CGC85

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1781_27 HRGMv2_1781_27_15 19257 19982 + GT51
TC HRGMv2_1781_27 HRGMv2_1781_27_16 20036 20308 - 8.A.8.1.5
pfam HRGMv2_1781_27 HRGMv2_1781_27_17 20305 21159 - RapZ-like_N | PapZ_C
TC HRGMv2_1781_27 HRGMv2_1781_27_18 21205 21693 - 4.A.2.1.4
pfam HRGMv2_1781_27 HRGMv2_1781_27_19 21759 22046 - Ribosomal_S30AE
pfam HRGMv2_1781_27 HRGMv2_1781_27_20 22069 23502 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC HRGMv2_1781_27 HRGMv2_1781_27_21 23550 24275 - 1.B.42.1.2
TC HRGMv2_1781_27 HRGMv2_1781_27_22 24282 24827 - 1.B.42.1.2
TC HRGMv2_1781_27 HRGMv2_1781_27_23 24796 25371 - 1.B.42.1.2
pfam HRGMv2_1781_27 HRGMv2_1781_27_24 25368 25934 - Hydrolase_3
STP HRGMv2_1781_27 HRGMv2_1781_27_25 25949 26935 - CBS | CBS | SIS
TC HRGMv2_1781_27 HRGMv2_1781_27_26 26950 27927 - 2.A.19.5.1
TC HRGMv2_1781_27 HRGMv2_1781_27_27 28137 28949 + 3.A.1.27.3
TC HRGMv2_1781_27 HRGMv2_1781_27_28 28957 29739 + 3.A.1.27.3
TC HRGMv2_1781_27 HRGMv2_1781_27_29 29744 30295 + 3.A.1.27.3
TC HRGMv2_1781_27 HRGMv2_1781_27_30 30314 30949 + 3.A.1.27.3
TC HRGMv2_1781_27 HRGMv2_1781_27_31 30949 31239 + 3.A.1.27.3
Gene ID: HRGMv2_1781_27_15
Type: CAZyme
Location: 19257 - 19982 (+)
Gene ID: HRGMv2_1781_27_16
Type: TC
Location: 20036 - 20308 (-)
Gene ID: HRGMv2_1781_27_17
Type: pfam
Location: 20305 - 21159 (-)
Gene ID: HRGMv2_1781_27_18
Type: TC
Location: 21205 - 21693 (-)
Gene ID: HRGMv2_1781_27_19
Type: pfam
Location: 21759 - 22046 (-)
Gene ID: HRGMv2_1781_27_20
Type: pfam
Location: 22069 - 23502 (-)
Gene ID: HRGMv2_1781_27_21
Type: TC
Location: 23550 - 24275 (-)
Gene ID: HRGMv2_1781_27_22
Type: TC
Location: 24282 - 24827 (-)
Gene ID: HRGMv2_1781_27_23
Type: TC
Location: 24796 - 25371 (-)
Gene ID: HRGMv2_1781_27_24
Type: pfam
Location: 25368 - 25934 (-)
Gene ID: HRGMv2_1781_27_25
Type: STP
Location: 25949 - 26935 (-)
Gene ID: HRGMv2_1781_27_26
Type: TC
Location: 26950 - 27927 (-)
Gene ID: HRGMv2_1781_27_27
Type: TC
Location: 28137 - 28949 (+)
Gene ID: HRGMv2_1781_27_28
Type: TC
Location: 28957 - 29739 (+)
Gene ID: HRGMv2_1781_27_29
Type: TC
Location: 29744 - 30295 (+)
Gene ID: HRGMv2_1781_27_30
Type: TC
Location: 30314 - 30949 (+)
Gene ID: HRGMv2_1781_27_31
Type: TC
Location: 30949 - 31239 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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