Cluster: HRGMv2_1781_CGC84
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1781
- CGC Family ID: CGCFAM_00627
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_43 | 44927 | 46264 | - | 2.A.40.7.6 |
| pfam | HRGMv2_1781_26 | HRGMv2_1781_26_44 | 46432 | 47097 | + | Hydrolase | HAD_2 |
| pfam | HRGMv2_1781_26 | HRGMv2_1781_26_45 | 47139 | 47876 | - | Glucosamine_iso |
| CAZyme | HRGMv2_1781_26 | HRGMv2_1781_26_46 | 47931 | 49097 | - | CE1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_47 | 49139 | 50785 | - | 1.B.3.1.3 |
| NULL(UNKNOWN) | HRGMv2_1781_26 | HRGMv2_1781_26_48 | 50814 | 51017 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1781_26 | HRGMv2_1781_26_49 | 51258 | 51983 | - | PhoU | PhoU |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_50 | 52033 | 52806 | - | 3.A.1.7.1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_51 | 52854 | 53744 | - | 3.A.1.7.1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_52 | 53744 | 54703 | - | 3.A.1.7.1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_53 | 54839 | 55879 | - | 3.A.1.7.1 |
| STP | HRGMv2_1781_26 | HRGMv2_1781_26_54 | 56196 | 58025 | - | SIS | SIS |
| pfam | HRGMv2_1781_26 | HRGMv2_1781_26_55 | 58207 | 59577 | - | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 |
| CAZyme | HRGMv2_1781_26 | HRGMv2_1781_26_56 | 59923 | 62094 | + | PL9_1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_57 | 62513 | 62932 | - | 3.A.2.1.1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_58 | 62953 | 64335 | - | 3.A.2.1.1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_59 | 64362 | 65225 | - | 3.A.2.1.1 |
| TC | HRGMv2_1781_26 | HRGMv2_1781_26_60 | 65276 | 65728 | - | 3.A.2.1.1 |
Gene ID: HRGMv2_1781_26_43
Type: TC
Location: 44927 - 46264 (-)
Type: TC
Location: 44927 - 46264 (-)
Gene ID: HRGMv2_1781_26_44
Type: pfam
Location: 46432 - 47097 (+)
Type: pfam
Location: 46432 - 47097 (+)
Gene ID: HRGMv2_1781_26_45
Type: pfam
Location: 47139 - 47876 (-)
Type: pfam
Location: 47139 - 47876 (-)
Gene ID: HRGMv2_1781_26_46
Type: CAZyme
Location: 47931 - 49097 (-)
Type: CAZyme
Location: 47931 - 49097 (-)
Gene ID: HRGMv2_1781_26_47
Type: TC
Location: 49139 - 50785 (-)
Type: TC
Location: 49139 - 50785 (-)
Gene ID: HRGMv2_1781_26_48
Type:
Location: 50814 - 51017 (+)
Type:
Location: 50814 - 51017 (+)
Gene ID: HRGMv2_1781_26_49
Type: pfam
Location: 51258 - 51983 (-)
Type: pfam
Location: 51258 - 51983 (-)
Gene ID: HRGMv2_1781_26_50
Type: TC
Location: 52033 - 52806 (-)
Type: TC
Location: 52033 - 52806 (-)
Gene ID: HRGMv2_1781_26_51
Type: TC
Location: 52854 - 53744 (-)
Type: TC
Location: 52854 - 53744 (-)
Gene ID: HRGMv2_1781_26_52
Type: TC
Location: 53744 - 54703 (-)
Type: TC
Location: 53744 - 54703 (-)
Gene ID: HRGMv2_1781_26_53
Type: TC
Location: 54839 - 55879 (-)
Type: TC
Location: 54839 - 55879 (-)
Gene ID: HRGMv2_1781_26_54
Type: STP
Location: 56196 - 58025 (-)
Type: STP
Location: 56196 - 58025 (-)
Gene ID: HRGMv2_1781_26_55
Type: pfam
Location: 58207 - 59577 (-)
Type: pfam
Location: 58207 - 59577 (-)
Gene ID: HRGMv2_1781_26_56
Type: CAZyme
Location: 59923 - 62094 (+)
Type: CAZyme
Location: 59923 - 62094 (+)
Gene ID: HRGMv2_1781_26_57
Type: TC
Location: 62513 - 62932 (-)
Type: TC
Location: 62513 - 62932 (-)
Gene ID: HRGMv2_1781_26_58
Type: TC
Location: 62953 - 64335 (-)
Type: TC
Location: 62953 - 64335 (-)
Gene ID: HRGMv2_1781_26_59
Type: TC
Location: 64362 - 65225 (-)
Type: TC
Location: 64362 - 65225 (-)
Gene ID: HRGMv2_1781_26_60
Type: TC
Location: 65276 - 65728 (-)
Type: TC
Location: 65276 - 65728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.