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Cluster: HRGMv2_1781_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_1 HRGMv2_1781_1_367 377137 377838 + 1.B.35.1.1
CAZyme HRGMv2_1781_1 HRGMv2_1781_1_368 377910 379619 + PL2_1
peptidase HRGMv2_1781_1 HRGMv2_1781_1_369 379675 380937 - M20.UPW
pfam HRGMv2_1781_1 HRGMv2_1781_1_370 380934 382175 - Aminotran_5
TC HRGMv2_1781_1 HRGMv2_1781_1_371 382186 382926 - 3.A.1.3.21
TC HRGMv2_1781_1 HRGMv2_1781_1_372 382907 383566 - 3.A.1.3.10
TC HRGMv2_1781_1 HRGMv2_1781_1_373 383563 384228 - 3.A.1.3.6
Gene ID: HRGMv2_1781_1_367
Type: TC
Location: 377137 - 377838 (+)
Gene ID: HRGMv2_1781_1_368
Type: CAZyme
Location: 377910 - 379619 (+)
Gene ID: HRGMv2_1781_1_369
Type: peptidase
Location: 379675 - 380937 (-)
Gene ID: HRGMv2_1781_1_370
Type: pfam
Location: 380934 - 382175 (-)
Gene ID: HRGMv2_1781_1_371
Type: TC
Location: 382186 - 382926 (-)
Gene ID: HRGMv2_1781_1_372
Type: TC
Location: 382907 - 383566 (-)
Gene ID: HRGMv2_1781_1_373
Type: TC
Location: 383563 - 384228 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1781_1_370 vegetarian > omnivore 2.15081 0.03798
HRGMv2_1781_1_370 vegetarian > vegan 4.16811 0.01251
HRGMv2_1781_1_371 vegetarian > omnivore 1.26386 0.03431
HRGMv2_1781_1_372 vegetarian > omnivore 3.41478 0.04336

🧭 Explore Read Mapping of CGC

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