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Cluster: HRGMv2_1781_CGC77

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_20 HRGMv2_1781_20_51 64198 64965 + 3.A.1.103.1
TC HRGMv2_1781_20 HRGMv2_1781_20_52 64965 65705 + 3.A.1.103.1
CAZyme HRGMv2_1781_20 HRGMv2_1781_20_53 65719 67611 + GT111 | GT8
pfam HRGMv2_1781_20 HRGMv2_1781_20_54 67630 68784 + DAO | Amino_oxidase | GLF | NAD_binding_8 | NAD_binding_9
CAZyme HRGMv2_1781_20 HRGMv2_1781_20_55 68781 69674 + GT2
CAZyme HRGMv2_1781_20 HRGMv2_1781_20_56 69687 70820 + GT4
CAZyme HRGMv2_1781_20 HRGMv2_1781_20_57 70954 72273 + GT2
Gene ID: HRGMv2_1781_20_51
Type: TC
Location: 64198 - 64965 (+)
Gene ID: HRGMv2_1781_20_52
Type: TC
Location: 64965 - 65705 (+)
Gene ID: HRGMv2_1781_20_53
Type: CAZyme
Location: 65719 - 67611 (+)
Gene ID: HRGMv2_1781_20_54
Type: pfam
Location: 67630 - 68784 (+)
Gene ID: HRGMv2_1781_20_55
Type: CAZyme
Location: 68781 - 69674 (+)
Gene ID: HRGMv2_1781_20_56
Type: CAZyme
Location: 69687 - 70820 (+)
Gene ID: HRGMv2_1781_20_57
Type: CAZyme
Location: 70954 - 72273 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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