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Cluster: HRGMv2_1781_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1781_19 HRGMv2_1781_19_102 105006 107042 + GH31_13
TC HRGMv2_1781_19 HRGMv2_1781_19_103 107088 108470 + 2.A.2.3.9
TC HRGMv2_1781_19 HRGMv2_1781_19_104 108514 109905 + 2.A.2.3.9
TC HRGMv2_1781_19 HRGMv2_1781_19_105 109989 110681 + 1.B.35.2.2
sulfatase HRGMv2_1781_19 HRGMv2_1781_19_106 110741 112564 - S1_97
pfam HRGMv2_1781_19 HRGMv2_1781_19_107 112943 114352 + Gln-synt_C | Gln-synt_N
TC HRGMv2_1781_19 HRGMv2_1781_19_108 114541 115590 + 2.A.21.9.1
Gene ID: HRGMv2_1781_19_102
Type: CAZyme
Location: 105006 - 107042 (+)
Gene ID: HRGMv2_1781_19_103
Type: TC
Location: 107088 - 108470 (+)
Gene ID: HRGMv2_1781_19_104
Type: TC
Location: 108514 - 109905 (+)
Gene ID: HRGMv2_1781_19_105
Type: TC
Location: 109989 - 110681 (+)
Gene ID: HRGMv2_1781_19_106
Type: sulfatase
Location: 110741 - 112564 (-)
Gene ID: HRGMv2_1781_19_107
Type: pfam
Location: 112943 - 114352 (+)
Gene ID: HRGMv2_1781_19_108
Type: TC
Location: 114541 - 115590 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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