Cluster: HRGMv2_1781_CGC74
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1781
- CGC Family ID: CGCFAM_03613
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_74 | 77917 | 80520 | + | 3.A.23.1.1 |
| pfam | HRGMv2_1781_19 | HRGMv2_1781_19_75 | 80696 | 81178 | + | EIIA-man |
| CAZyme | HRGMv2_1781_19 | HRGMv2_1781_19_76 | 81175 | 82350 | + | GH88 |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_77 | 82364 | 82861 | + | 4.A.6.1.3 |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_78 | 82873 | 83676 | + | 4.A.6.1.19 |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_79 | 83669 | 84511 | + | 4.A.6.1.19 |
| pfam | HRGMv2_1781_19 | HRGMv2_1781_19_80 | 84734 | 85432 | + | KdgM |
| CAZyme | HRGMv2_1781_19 | HRGMv2_1781_19_81 | 85481 | 86992 | - | CBM91 | GH43_10 |
| pfam | HRGMv2_1781_19 | HRGMv2_1781_19_82 | 87137 | 87349 | - | YdgH_BhsA-like |
| pfam | HRGMv2_1781_19 | HRGMv2_1781_19_83 | 87478 | 88314 | - | FdhD-NarQ |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_84 | 88471 | 89058 | + | 5.A.3.2.1 |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_85 | 89107 | 91521 | + | 5.A.3.2.1 |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_86 | 91534 | 92436 | + | 5.A.3.2.1 |
| TC | HRGMv2_1781_19 | HRGMv2_1781_19_87 | 92433 | 93068 | + | 5.A.3.2.1 |
Gene ID: HRGMv2_1781_19_74
Type: TC
Location: 77917 - 80520 (+)
Type: TC
Location: 77917 - 80520 (+)
Gene ID: HRGMv2_1781_19_75
Type: pfam
Location: 80696 - 81178 (+)
Type: pfam
Location: 80696 - 81178 (+)
Gene ID: HRGMv2_1781_19_76
Type: CAZyme
Location: 81175 - 82350 (+)
Type: CAZyme
Location: 81175 - 82350 (+)
Gene ID: HRGMv2_1781_19_77
Type: TC
Location: 82364 - 82861 (+)
Type: TC
Location: 82364 - 82861 (+)
Gene ID: HRGMv2_1781_19_78
Type: TC
Location: 82873 - 83676 (+)
Type: TC
Location: 82873 - 83676 (+)
Gene ID: HRGMv2_1781_19_79
Type: TC
Location: 83669 - 84511 (+)
Type: TC
Location: 83669 - 84511 (+)
Gene ID: HRGMv2_1781_19_80
Type: pfam
Location: 84734 - 85432 (+)
Type: pfam
Location: 84734 - 85432 (+)
Gene ID: HRGMv2_1781_19_81
Type: CAZyme
Location: 85481 - 86992 (-)
Type: CAZyme
Location: 85481 - 86992 (-)
Gene ID: HRGMv2_1781_19_82
Type: pfam
Location: 87137 - 87349 (-)
Type: pfam
Location: 87137 - 87349 (-)
Gene ID: HRGMv2_1781_19_83
Type: pfam
Location: 87478 - 88314 (-)
Type: pfam
Location: 87478 - 88314 (-)
Gene ID: HRGMv2_1781_19_84
Type: TC
Location: 88471 - 89058 (+)
Type: TC
Location: 88471 - 89058 (+)
Gene ID: HRGMv2_1781_19_85
Type: TC
Location: 89107 - 91521 (+)
Type: TC
Location: 89107 - 91521 (+)
Gene ID: HRGMv2_1781_19_86
Type: TC
Location: 91534 - 92436 (+)
Type: TC
Location: 91534 - 92436 (+)
Gene ID: HRGMv2_1781_19_87
Type: TC
Location: 92433 - 93068 (+)
Type: TC
Location: 92433 - 93068 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.