dbCAN Logo

Cluster: HRGMv2_1781_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_16 HRGMv2_1781_16_20 19087 20100 - 2.A.52.1.1
pfam HRGMv2_1781_16 HRGMv2_1781_16_21 20112 22331 - Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC HRGMv2_1781_16 HRGMv2_1781_16_22 22344 22871 - 5.A.3.3.1
TF HRGMv2_1781_16 HRGMv2_1781_16_23 23006 24019 - LacI
TC HRGMv2_1781_16 HRGMv2_1781_16_24 24276 25718 + 4.A.1.2.3
CAZyme HRGMv2_1781_16 HRGMv2_1781_16_25 25745 27169 + GH1
peptidase HRGMv2_1781_16 HRGMv2_1781_16_26 27381 27866 - A31.003
pfam HRGMv2_1781_16 HRGMv2_1781_16_27 27859 28269 - HycH
TC HRGMv2_1781_16 HRGMv2_1781_16_28 28266 29033 - 3.D.1.9.2
TC HRGMv2_1781_16 HRGMv2_1781_16_29 29033 29575 - 3.D.1.9.2
TC HRGMv2_1781_16 HRGMv2_1781_16_30 29585 31294 - 3.D.1.9.2
TC HRGMv2_1781_16 HRGMv2_1781_16_31 31312 32235 - 3.D.1.9.2
TC HRGMv2_1781_16 HRGMv2_1781_16_32 32238 34064 - 3.D.1.9.2
TC HRGMv2_1781_16 HRGMv2_1781_16_33 34061 34669 - 3.D.1.9.2
Gene ID: HRGMv2_1781_16_20
Type: TC
Location: 19087 - 20100 (-)
Gene ID: HRGMv2_1781_16_21
Type: pfam
Location: 20112 - 22331 (-)
Gene ID: HRGMv2_1781_16_22
Type: TC
Location: 22344 - 22871 (-)
Gene ID: HRGMv2_1781_16_23
Type: TF
Location: 23006 - 24019 (-)
Gene ID: HRGMv2_1781_16_24
Type: TC
Location: 24276 - 25718 (+)
Gene ID: HRGMv2_1781_16_25
Type: CAZyme
Location: 25745 - 27169 (+)
Gene ID: HRGMv2_1781_16_26
Type: peptidase
Location: 27381 - 27866 (-)
Gene ID: HRGMv2_1781_16_27
Type: pfam
Location: 27859 - 28269 (-)
Gene ID: HRGMv2_1781_16_28
Type: TC
Location: 28266 - 29033 (-)
Gene ID: HRGMv2_1781_16_29
Type: TC
Location: 29033 - 29575 (-)
Gene ID: HRGMv2_1781_16_30
Type: TC
Location: 29585 - 31294 (-)
Gene ID: HRGMv2_1781_16_31
Type: TC
Location: 31312 - 32235 (-)
Gene ID: HRGMv2_1781_16_32
Type: TC
Location: 32238 - 34064 (-)
Gene ID: HRGMv2_1781_16_33
Type: TC
Location: 34061 - 34669 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1781_16_23 vegetarian > omnivore 1.72651 0.03072

🧭 Explore Read Mapping of CGC

← Back to Cluster List