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Cluster: HRGMv2_1781_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_16 HRGMv2_1781_16_6 5559 6437 - 3.A.1.15.10
TC HRGMv2_1781_16 HRGMv2_1781_16_7 6446 7309 - 3.A.1.15.10
TC HRGMv2_1781_16 HRGMv2_1781_16_8 7306 7983 - 3.A.1.15.10
CAZyme HRGMv2_1781_16 HRGMv2_1781_16_9 8220 9296 - GH103
TC HRGMv2_1781_16 HRGMv2_1781_16_10 9559 10122 + 4.A.4.1.1
TC HRGMv2_1781_16 HRGMv2_1781_16_11 10119 11096 + 4.A.4.1.1
TC HRGMv2_1781_16 HRGMv2_1781_16_12 11110 11472 + 4.A.4.1.1
Gene ID: HRGMv2_1781_16_6
Type: TC
Location: 5559 - 6437 (-)
Gene ID: HRGMv2_1781_16_7
Type: TC
Location: 6446 - 7309 (-)
Gene ID: HRGMv2_1781_16_8
Type: TC
Location: 7306 - 7983 (-)
Gene ID: HRGMv2_1781_16_9
Type: CAZyme
Location: 8220 - 9296 (-)
Gene ID: HRGMv2_1781_16_10
Type: TC
Location: 9559 - 10122 (+)
Gene ID: HRGMv2_1781_16_11
Type: TC
Location: 10119 - 11096 (+)
Gene ID: HRGMv2_1781_16_12
Type: TC
Location: 11110 - 11472 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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